Gene Information

Name : xcpT (PSF113_0441)
Accession : YP_005205870.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein XcpT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 526622 - 527077 bp
Length : 456 bp
Strand : +
Note : General secretion pathway protein G

DNA sequence :
ATGAAACTCCAAAGCAAGCAACCTGCACGCCCTCAACGCGGCTTCACCCTGATTGAAATCATGGTGGTGGTGGTCATCAT
TGGCGTGCTGGGCGCCATCGTGGTGCCGCAGTTCATGAGCCGACCCGACCAGGCCAAGGTCACGGCCGCCCGCACCGATA
TCCAGGCGATCGCCACGGCCCTGGAAATGTACCGCCTCGACAACTTCCAGTACCCGTCGACCCAACATGGCCTGGAGGCG
CTGAGCAAACGCCCGTCCGGTACGCCTGCGGCAAGGAACTGGAACCCCCAGGGCTATCTGAAAAACCTGCCGATCGACCC
CTGGGGCACGCCCTATCAGTACCTCAATCCGGGGCACAAATCCCTCGATGGCAGCTATGACCTCTACTCCCTGGGCGCCG
ATGGCGTACTGGGCGGTGAAGGCATGGCGGCTGACATCGGCAATTGGGTCGAGTGA

Protein sequence :
MKLQSKQPARPQRGFTLIEIMVVVVIIGVLGAIVVPQFMSRPDQAKVTAARTDIQAIATALEMYRLDNFQYPSTQHGLEA
LSKRPSGTPAARNWNPQGYLKNLPIDPWGTPYQYLNPGHKSLDGSYDLYSLGADGVLGGEGMAADIGNWVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-24 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-25 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT YP_005205870.1 protein XcpT VFG0180 Protein 1e-36 71
xcpT YP_005205870.1 protein XcpT VFG1871 Protein 3e-23 53
xcpT YP_005205870.1 protein XcpT VFG2050 Protein 3e-25 52