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Name : xcpS (PSF113_0440) Accession : YP_005205869.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein XcpS Function : - COG functional category : - COG ID : - EC number : - Position : 525410 - 526618 bp Length : 1209 bp Strand : + Note : General secretion pathway protein F DNA sequence : GTGCCGACCTTCGACTATCGGGCCGAAGACGCCCAGGGCCGCCGCTGCAAGGGTCATGTGGAAGCCGACAGCCCGCGCCA TGCTCGCCAGTTGCTGCGCGAGCGCGGCTTGCTGCCCAGCGAACTGGCTGAAGCCAAGGAACCGCGAACCTTGGGCGGGC GACATGTCGGGGCGCGTTTGAGCCCGGCAGATCTGGCGTTGCTGACATTGCAGCTGTCCACCTTGATCCAGGCCGGCCTG CCCCTCGAAGAGTCCCTGGGAGCGGTGGCGCAACAGAGCCAGAAGCGCCGCGTTGCCCACCTGCTGACGGCGGTGCGCAG CCGGGTGATGGAAGGCCATGCGTTGGCGGCGGCACTGAGGGCCTTTCCCCAGGCGTTCCCCGAGCTGTTCTGCGCCACGG TCGCGGCAGGCGAGCAATCCGGGCACCTGGGGCACGTGTTGGAACAGTTGGCGAGCTACACCCAGGCGCGCCAGGCGTCA CGCCAGCGCATTCAACTGGCGTTGGTGTACCCGCTGATCCTGATGCTGGCCTGTGTCGCGATTGTTGGCTTCCTGCTGGG ATACGTGGTGCCGGATGTGGTGAAGATTTTCATCGACAGCGGCCAGCCGTTGCCCTGGCTGACCCAGGCGCTGATCGCCG TGAGCGATGGCTTGCGCCGCTATGGCCTGCTGCTGCTCGGTGCGCTGGCCGGGCTGCTCGGGCTATGGCGTTGGAGCCTG CGCCAACCGGCGTGGCGCCTGCGCTGGCACCGTGTGTTGCTGCGGCTGCCGGTGTTGAGCGAAGTGCTGCGGGCGATGGA GGCGGCCCGATTCGCCAGCACCCTGGCGATCCTGAGCAAAAGCGCCGTGCCTTTAGTGGATGCCTTGCACATCGCCGCGC AGGTGATCGGCAACCTGACGATTCGCGCCCGCATGGCCGACGTCGCCCGTTCGGTCCGCGAAGGCGGGACCCTGACCCGC GGCCTGGAGCAGGGCGGCGATATCCCGCCGCTGATGCTGCACATGATCGCCAGCGGCGAACGGGCCGGCGAGCTCGACAG CATGCTGGCCCGGGCCGCCGAACAACAGGAAGCCAGCCTCGCGGCGCGTATCGCGCTGGTGGTGAGCCTGTTCGAACCGG TCATGTTGGTGCTGATGGGCGGCGTCGTGCTGCTGATCGTCATGGCCATCCTCCTACCGATCCTGAGCCTCAACCAATTG GTGAATTGA Protein sequence : MPTFDYRAEDAQGRRCKGHVEADSPRHARQLLRERGLLPSELAEAKEPRTLGGRHVGARLSPADLALLTLQLSTLIQAGL PLEESLGAVAQQSQKRRVAHLLTAVRSRVMEGHALAAALRAFPQAFPELFCATVAAGEQSGHLGHVLEQLASYTQARQAS RQRIQLALVYPLILMLACVAIVGFLLGYVVPDVVKIFIDSGQPLPWLTQALIAVSDGLRRYGLLLLGALAGLLGLWRWSL RQPAWRLRWHRVLLRLPVLSEVLRAMEAARFASTLAILSKSAVPLVDALHIAAQVIGNLTIRARMADVARSVREGGTLTR GLEQGGDIPPLMLHMIASGERAGELDSMLARAAEQQEASLAARIALVVSLFEPVMLVLMGGVVLLIVMAILLPILSLNQL VN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 7e-49 | 47 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-49 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_005205869.1 | protein XcpS | VFG0181 | Protein | 2e-79 | 60 |
| xcpS | YP_005205869.1 | protein XcpS | VFG2049 | Protein | 6e-48 | 44 |
| xcpS | YP_005205869.1 | protein XcpS | VFG1870 | Protein | 2e-51 | 41 |
