Gene Information

Name : PSF113_3923 (PSF113_3923)
Accession : YP_005209315.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : Murein-DD-endopeptidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.16.4
Position : 4621718 - 4622695 bp
Length : 978 bp
Strand : +
Note : -

DNA sequence : 
TTGCTCAACGGCACCTTCAACTCTATCGAGTCTACTCGCGTGAAAATCCGTCTTTCCATCATCAGCCTATTCATCGCTTT
CACAGGCAGCTTTATCACGCAAAATGTCGTTGCACAGGAAACCATCGCGGCCCCTCGCGACACGACCAAGCTGCAAGTCG
CCTCGGGCAGCGCGATGTTGCTGGACCTGCAGACGGATAAAGTCGTTTATTCGAGCAACCCGGACGTGGTGGTGCCCATC
GCGTCGGTAACCAAGTTGATGACCGGCCTGATCGTGCTGGATGCCAAACAGAACCTGGATGAATACATTTCCATCACCAT
CGCCAACACCCCAGAGATGAAGGGCGTGTTTTCCCGGGTCAAGCTCAACAGCGAACTGTCGCGCCGGGACGTGCTGCTGA
TCGCCCTGATGTCTTCGGAAAACCGTGCCGCCGCCAGTCTCGCCCACCACTATCCGGGCGGCTACGCGGCGTTCATTGCC
GCCATGAACGCCAAGGCGAAGGCGCTGGGCATGACCAGCACCCATTACGTCGAGCCAACGGGCCTGTCGATCCACAACGT
CTCGACCGCCAGGGACCTGACCAAGCTGCTGATCGCTGCTCGCAAGTATCCACTGCTGAGCGAACTGAGCACCACCAAGG
AAAAGACCGTTACCTTCCGCAAGCCGGTCTACAGCCTGGGCTTTCGCAACACTGATCACCTGGTCCACAAGGCCAACTGG
GATATCCAGTTGACCAAGACCGGCTTCACCAACCAGGCTGGCCACTGCCTGGTGCTGGTGACGAAGATGGGCAATCGCCC
GATGGCACTGGTGATCCTCGATGCATTCGGCAAGTACACGCACTTCGCCGATGCCAGTCGGATTCGTAGCTGGGTGGAAA
CCGGAAAAAGCGCCGCAGTGCCGGCGGTGGCCCTTCAATACAAGGCTGCCAAGAATCTCAAGAGCCGCCAGAGTGGTGTG
GTGGAAGCTTCCAAGTAA

Protein sequence : 
MLNGTFNSIESTRVKIRLSIISLFIAFTGSFITQNVVAQETIAAPRDTTKLQVASGSAMLLDLQTDKVVYSSNPDVVVPI
ASVTKLMTGLIVLDAKQNLDEYISITIANTPEMKGVFSRVKLNSELSRRDVLLIALMSSENRAAASLAHHYPGGYAAFIA
AMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLTKLLIAARKYPLLSELSTTKEKTVTFRKPVYSLGFRNTDHLVHKANW
DIQLTKTGFTNQAGHCLVLVTKMGNRPMALVILDAFGKYTHFADASRIRSWVETGKSAAVPAVALQYKAAKNLKSRQSGV
VEASK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 1e-36 41
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 1e-36 41