Gene Information

Name : glnA (PSF113_0364)
Accession : YP_005205793.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein GlnA
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 428878 - 430284 bp
Length : 1407 bp
Strand : -
Note : Glutamine synthetase type I

DNA sequence :
ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAGTGGATTGATCTGCGCTTCACTGACACCAAAGGTACTCA
ACATCACGTGACCATGCCGGCCCGTGATGCGCTGGACGACGAATTCTTTGAAATCGGGAAAATGTTCGACGGTTCCTCCA
TCTCCGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGATGCCGGACGACGAAACTGCCGTCCTGGACCCGTTCACC
GAAGAGCCGACCCTGATCCTGGTCTGCGACATCATCGAACCTTCGACCATGCAAGGCTATGACCGCGACCCACGCGCCAT
CGCCCACCGCGCCGAGGAATACCTGAAGTCCACCGGTATCGGTGACACCGCTTTCTTCGGTCCTGAGCCTGAGTTCTTCA
TCTTCGACTCGGTCAAATTCAAGTCCGACATCTCCGGCTCCATGTTCAAGATCTTCTCCGAACAGGGTTCGTGGATGTCC
GACCAGGACGTGGAAGGCGGCAACAAAGGCCACCGTCCAGGTATCAAAGGCGGTTACTTCCCGGTTCCACCGTTCGACTT
CGACCACGAAATCCGTACCTCCATGTGCAACGCACTGGAAGAAATGGGCCAGACCGTGGAAGTTCACCACCACGAAGTGG
CAACTGCCGGCCAGAACGAAATCGGCGTGAAATTCAACACGCTGGTCAAGAAGGCTGACGAAGTCCAGACCCTGAAGTAC
TGCGTACACAACGTTGCCGACGCCTACGGCCGCACCGCGACCTTCATGCCGAAGCCTCTGTACGGCGACAACGGTTCGGG
CATGCACGTTCACATGTCGATCTCCAAAGACGGCAAGAACACCTTCGCAGGCGAAGGCTATGCCGGCCTGTCTGACACCG
CCCTGTACTTCATCGGCGGTATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGTCGACCAACTCCTACAAG
CGTCTGGTACCTGGCTTCGAAGCCCCGGTCATGCTGGCCTACTCGGCTCGCAACCGTTCCGCCTCGATCCGTATTCCTTA
CGTGAACAGCCCTAAAGCCCGCCGTATCGAAGCGCGCTTCCCGGATCCGGCTGCCAACCCGTACCTGGCCTTCGCTGCAC
TGATGATGGCCGGTCTGGACGGTATCCAGAACAAGATCCACCCTGGCGACGCCGCTGACAAAAACCTGTATGACCTGCCG
CCTGAAGAGGCCAAGGAAATTCCACAGGTGTGTGGCAGCTTGAAAGAAGCCCTGGAAGAGCTGGACAAGGGCCGTGCCTT
CCTGACCAAGGGCGGCGTATTCAGCGATGACTTCATCGACGCTTACATCGCACTGAAAAGCGAAGAAGAAATCAAGGTTC
GCACCTTCGTACACCCACTGGAATATGAGCTGTACTACAGCTGCTAA

Protein sequence :
MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALDDEFFEIGKMFDGSSISGWKGIEASDMILMPDDETAVLDPFT
EEPTLILVCDIIEPSTMQGYDRDPRAIAHRAEEYLKSTGIGDTAFFGPEPEFFIFDSVKFKSDISGSMFKIFSEQGSWMS
DQDVEGGNKGHRPGIKGGYFPVPPFDFDHEIRTSMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQTLKY
CVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSISKDGKNTFAGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVNSPKARRIEARFPDPAANPYLAFAALMMAGLDGIQNKIHPGDAADKNLYDLP
PEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIKVRTFVHPLEYELYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-105 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005205793.1 protein GlnA VFG1399 Protein 6e-103 51