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Name : hxcR (PSF113_3699) Accession : YP_005209095.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein HxcR/XcpR2 Function : - COG functional category : - COG ID : - EC number : - Position : 4367896 - 4369341 bp Length : 1446 bp Strand : + Note : General secretion pathway protein E DNA sequence : ATGGCCAAGTGGTCGGAGTTTGTTCCCATGAACACCCTCCCATACGCCTGGGCCAAGGCCCAACGCCTGGTGCTGCGCCC ATCCGAAGAAGGCGCGGTGCTGATGGTGTGTCCGTCCACGCCGGGCTGGTCCATCAGTGAGGTGCGCCGCCAGTTTGGCG AGGTACGGCTGGAGCGGGTGCGCGACGAGGAACTCGACGGGCTGCTTAACAATGCCTATGCCGACACCGGCAGCGCCGCG GCGGTGGTGGGCGCGGCGGAAAACGAAGTCGACCTCGACCGGTTGATGCAGGACATCCCCGAGATCACCGACCTGCTGGA CACCCAGGACGGTGCGCCGGTGATTCGCATGATCAACGCCTTGCTGACCCAGGCCGCACGGGACGAGGCCAGCGACATCC ACATCGAACCCTACGAGAGCCATTCGGTGGTGCGCTACCGCGTCGACGGCACCCTGCGCGATGTGGTTTCGCCGCGCAAG GCCCTGCATGGCGCGCTGGTGTCACGGATCAAGATCATGGCCCAGCTCGACATCGCCGAAAAACGCCTGCCCCAGGACGG CCGCATCGCCTTGCGCGTGGCCGGCCGACCCATCGATATCCGCGTCTCGACGGTGCCCACCGGCCACGGCGAACGGGTGG TGATGCGGTTGCTGGACAAGCAGGCCGGACGCCTGCAACTGGAAACGTTGGGGATGGACACGGACGTGCTGGGCAAGCTC GATCACTTGATTCGCCAGCCCCACGGCATCGTCCTGGTCACCGGCCCCACGGGCAGCGGCAAGACCACCAGTCTCTACGC CGCCCTGGCCCGACTGGACGCCAGCGTCCACAACATCCTCACGGTGGAGGACCCAGTGGAATATGACCTGCCGGGCATCA GCCAGATCCAGGTCAACGCCAAGATCGACATGACCTTCGCCCTGGCCCTGCGGGCGATCCTGCGCCAGGACCCGGACATC ATCATGATCGGCGAAATCCGTGACCTGGAGACTGCGCAAATCGCCGTGCAAGCCTCCCTCACCGGTCACTTGGTGCTGGC GACGCTGCACACCAACGACGCGGTGTCAGCCATCAACCGCTTGATCGACATGGGCGTCGAGCCGTTCCTGCTGGCCTCAT CGATGCTCGGCGTGCTCGCCCAGCGACTGGTGCGCAGGTTGTGCCCGCAGTGCAAACAGCCTGATCCGGCCACGCCCGGC ACCTGGCGGCCGGTGGGGTGCCCGACCTGTAACCAGACCGGCTACAGCGGCCGCACCGGCATCCATGAATTGTTCTGCAT CGACGATGACATCCGCACGCTGATCCACCAGGGGGCAGGGGAGCAGGCATTGCGCGCCGCCGCTCGCCGAGCGGGGATGT TCAGCATGCGCGAGGACGGCGAGCGCTGGGTGCGCAGTGGCACCACGGCCCCTGAAGAAATCCTGCGCGTAACACGGGAC GCCTGA Protein sequence : MAKWSEFVPMNTLPYAWAKAQRLVLRPSEEGAVLMVCPSTPGWSISEVRRQFGEVRLERVRDEELDGLLNNAYADTGSAA AVVGAAENEVDLDRLMQDIPEITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYESHSVVRYRVDGTLRDVVSPRK ALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMDTDVLGKL DHLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASVHNILTVEDPVEYDLPGISQIQVNAKIDMTFALALRAILRQDPDI IMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAINRLIDMGVEPFLLASSMLGVLAQRLVRRLCPQCKQPDPATPG TWRPVGCPTCNQTGYSGRTGIHELFCIDDDIRTLIHQGAGEQALRAAARRAGMFSMREDGERWVRSGTTAPEEILRVTRD A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-109 | 57 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-109 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hxcR | YP_005209095.1 | protein HxcR/XcpR2 | VFG0182 | Protein | 3e-120 | 62 |
| hxcR | YP_005209095.1 | protein HxcR/XcpR2 | VFG2048 | Protein | 6e-109 | 57 |
| hxcR | YP_005209095.1 | protein HxcR/XcpR2 | VFG1876 | Protein | 3e-114 | 51 |
| hxcR | YP_005209095.1 | protein HxcR/XcpR2 | VFG2426 | Protein | 1e-78 | 49 |
