Gene Information

Name : hxcT (PSF113_3694)
Accession : YP_005209090.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein HxcT/XcpT2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4362197 - 4362646 bp
Length : 450 bp
Strand : +
Note : General secretion pathway protein G

DNA sequence : 
ATGCAGATTGCCCGTTACAAAGCCCGTTTCCCAGGCCCTCGCGGGCAGTCGGGTTTCACCCTGATCGAAATCATGGTCGT
GGTGGTGATCCTCGGCATCCTGGCGGCGATGGTGGTGCCCAAGGTCCTCGACCGCCCTGACCAGGCGCGGGCAACGGCGG
CGAAACAGGACATTGGCGGCCTGATGCAAGCCCTGAAGCTGTATCGCCTGGACCACGGCAGTTACCCGAGCATGAACCAG
GGTCTCAAGGTGCTGGTGGAAAAGCCGGCCGATGCGAAAAACAGCACCTGGCGCTCTTACCTGGAGCGCCTGCCCAACGA
CCCATGGGGCCGTCCATATAACTACCTCAACCCGGGTGCCAACGGCGAAGTCGATATCTTTTCCCTGGGGGCCGACGGTC
AGCCTGACGGCGACGGCGTGAATGCCGACATTGGCTCCTGGCAGTTGTAA

Protein sequence : 
MQIARYKARFPGPRGQSGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGSYPSMNQ
GLKVLVEKPADAKNSTWRSYLERLPNDPWGRPYNYLNPGANGEVDIFSLGADGQPDGDGVNADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-32 50
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-33 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hxcT YP_005209090.1 protein HxcT/XcpT2 VFG1871 Protein 4e-40 60
hxcT YP_005209090.1 protein HxcT/XcpT2 VFG0180 Protein 4e-36 58
hxcT YP_005209090.1 protein HxcT/XcpT2 VFG2050 Protein 2e-33 50