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Name : oppB3 (PSF113_3619) Accession : YP_005209015.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein OppB Function : - COG functional category : - COG ID : - EC number : - Position : 4253777 - 4255387 bp Length : 1611 bp Strand : - Note : Oligopeptide transport system permease protein OppB DNA sequence : ATGAACCAGGATAATCTGATCGAAGTGCGCGACCTGGCGGTGGAGTTCATTGTCGGCGAGCGCCGCCAGCGCGTGGTCGA GGGGGTCAGCTTCGATATCAAGCGCGGCGAAACCCTGGCCCTGGTGGGTGAAAGCGGCTCGGGCAAATCGGTCACCGCCC ACTCGATCCTGCGGTTGCTGCCCTACCCGCTGGCCCATCACCCCACCGGCACTATCCAGTACGCCGGCCAGAATTTGCTG GGCCTGAAGGAAAAAACCATCCGGCATATCCGTGGCAATCGGATCGCGATGATCTTCCAGGAGCCGATGACCTCCCTCAA CCCGCTGCACTCCATTGAAAAACAGATCAATGAAGTGCTCGGCATTCACAAGGGCCTGAGCGGCAAGGTCGCGACCCGCA GGACCCTTGAGTTGCTGGAGCTGGTTGGCATTCCCGAGCCCCACAAGCGCCTCAAGGCCCTGCCCCACGAGTTGTCGGGC GGCCAGCGTCAGCGGGTGATGATCGCCATGGCCCTGGCCAATGAGCCGGAACTGCTGATCGCCGACGAGCCGACCACTGC CCTGGACGTCACCGTCCAGCTGAAAATCCTCCAATTGCTCAAGGAACTGCAGGCGCGATTGGGCATGTCGCTGCTGCTGA TCAGCCACGATTTGAACCTTGTACGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCGGTTGCATCGTCGAACAGGCA TCGTGCGAAGAGTTGTTCCGCGCACCGCAGCATCCGTACACTCGGGAACTGCTGGGCGCCGAGCCCAGCGGCACCCCGGC GAACAACGTTGTCGGCCCGCCGCTGTTGCAGGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGTTCAAAC GCACGGTAGACTACATCAAGGCCGTGGACGGTATCCGCTTCAGCCTGCCCCAGGGTCAGACCTTGGGCATCGTCGGCGAA AGCGGTTCCGGCAAATCCACCCTGGGGCTGGCAATCCTGCGGTTGATCGGCAGCCAGGGCGGGATCCGTTTCGAAGGCAA GCAGCTGGACAGCCTGACGCAGCAACAAGTCCGGCCGCTGCGCCGGGAGATGCAAGTGGTGTTTCAGGACCCGTTTGGTA GCCTGAGCCCACGGATGTGTGTGAGCCAGATCGTCGGCGAAGGCCTGCGGATCCACAAGATCGGCACCGAAGCCGAACAG GAACAAGCGATAATCGCGGCATTGAAGGAGGTAGGCCTGGACCCGGAAACCCGGAACCGCTACCCCCATGAATTTTCCGG AGGGCAGCGGCAGCGTATCGCCATTGCCCGGGCCCTGGTGCTCAAGCCGGCGTTGATTCTGCTGGATGAACCGACGTCGG CGCTGGACCGTACCGTGCAACGCCAAGTGGTGGAGCTGTTGCGGTCGTTGCAAACCAAGTACAACCTGACGTACCTGTTT ATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGCTGATGGTGGTCAAGCATGGCCAAGTGGTCGAACAAGG TGATGCCCGCAGCATATTCGCCGCGCCGCAGCACCCCTATACACAGCAGTTGCTGGAGGCCGCCTTCCTGGCCCCAACAA CTGCCGAATAA Protein sequence : MNQDNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLAHHPTGTIQYAGQNLL GLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGIHKGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILQLLKELQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA SCEELFRAPQHPYTRELLGAEPSGTPANNVVGPPLLQVEDLKVWFPIKKGLFKRTVDYIKAVDGIRFSLPQGQTLGIVGE SGSGKSTLGLAILRLIGSQGGIRFEGKQLDSLTQQQVRPLRREMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKIGTEAEQ EQAIIAALKEVGLDPETRNRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLF ISHDLAVVKALSHQLMVVKHGQVVEQGDARSIFAAPQHPYTQQLLEAAFLAPTTAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-90 | 42 |
