Gene Information

Name : PSF113_3325 (PSF113_3325)
Accession : YP_005208720.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : transposase orf3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3920434 - 3922029 bp
Length : 1596 bp
Strand : -
Note : -

DNA sequence :
GTGGCCTGCTTTGGTAAAATCCACGGCATGACGTCCTCACCCAATCTCGATCAAATGACTCCCGACCAGCTACGTGCATT
CGCTGCGCAGTTGCTGTCGCAAGTCGAGACCCTGGGCAAGACGGTTGAAACCATGGGCAAGACAGTTGACACCATGGGCA
AGAAGATCAACCGCGATCAAACGGTGATCGAGAAACTGACCCACGAAATCGCGCAACTCAAGCGTTTGAAGTTTGCCAAG
CGTAGCGAGCAGATGAATCCTGAGCAGGCCAGTCTGCTCGATGACCTGATCGATACCGATATCGCGGCGATTGAGGCCGA
GCTTCAAGCCTTGCAAATAGCGCCAGCGACGACCGAGAAAAAGCAAAAGCCCAAGCGCACGGCATTGCCGGCGGAATTCC
CACGCACGTTGATCCATCATGAACCGGACAACACTCGCTGCCCTTGTGGCTGCGCACTCAAGCGTATCGGTGAAGACGTC
AGCGAAAAGCTGGACTACACACCCGGCGTGTTCACCGTCGAACGCCATGTTCGTGGCAAGTGGGTTTGCGATGACTGCGA
AACGCTGATCCAAGCGCCCGTACCGGCGCAGGTCATCGACAAAGGTATCCCAACGGCAGGCTTACTTGCCCACGTCATGA
TCGCGAAGTTCGCTGACCATTTGCCGCTCTACCGCCAGGAATCGATTTTCGGTCGCGCCGGCTTGGCGATTCCACGCTCC
ACTTTGGCTCAATGGGTTGGAATGACGGGTGTGCAATTACAGCCCCTGGTCGATGCCCTGCGTGACGTAGTGATGGGACA
GCAAGTCATCCACGCGGATGAAACACCGGTACAGATGCTTGCTCCAGGTTCGAAGAAAACCCACCGGTCTTATGTTTGGG
CTTACGCCACGAGCCAGTTCTGCGAAACAGCCGCTGTCGTCTACGACTTCAGCCCCAGCCGCGCCGGTGAGCATGCTCGC
AACTTCCTGCAAGGCTGGAAAGGTAAGTTGGTCTGCGACGACTTTGGCGGTTACAAGGCCAGCTTCGAACTCGGCGTGAC
CGAGATCGGCTGCATGGCCCATGCCCGACGCAAGTTTTTCGAATTGCACGCGACCAACAAAAGCCAGATCGCCGAGCAGG
CCCTGCGCTACATCCAGTTGCTGTACGAAATCGAGAGCGAAGTGCGTGATCTGGAACCGGATTTACGGTGCCGAATACGA
CAAGAAAAAGCCGCTCCGGTGATGGATAGATTGCATGTCTGGATGATCGCCCAGCGTGATCTTGTGCCCGAAGGTTCGGC
CATCAGCAGAGCACTCGATTACAGTCTCAAACGCTGGGCAGCGCTGTCGCGCTACCTCGATGATGGGGCCGTCCCCATTG
ATAATAACTGGGCGGAGAACCAGATCCGGCCGTGGGCTCTTGGACGCAAAAACTGGCTCTTCGCTGGGTCGCTACGTAGC
GGAAAACGGGCGGCAGCGATCATGAGTTTGATCCAGTCTGCGCGGCTGAATGGTCATGACCCGTACGCCTATCTAAAGGA
TGTTCTCACGCGTTTACCGACGCAGCGGGCGAGTGAAATCGAGCTGCTGCTTCCGCATAAGTGGCAGCCGGTTTAA

Protein sequence :
MACFGKIHGMTSSPNLDQMTPDQLRAFAAQLLSQVETLGKTVETMGKTVDTMGKKINRDQTVIEKLTHEIAQLKRLKFAK
RSEQMNPEQASLLDDLIDTDIAAIEAELQALQIAPATTEKKQKPKRTALPAEFPRTLIHHEPDNTRCPCGCALKRIGEDV
SEKLDYTPGVFTVERHVRGKWVCDDCETLIQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGLAIPRS
TLAQWVGMTGVQLQPLVDALRDVVMGQQVIHADETPVQMLAPGSKKTHRSYVWAYATSQFCETAAVVYDFSPSRAGEHAR
NFLQGWKGKLVCDDFGGYKASFELGVTEIGCMAHARRKFFELHATNKSQIAEQALRYIQLLYEIESEVRDLEPDLRCRIR
QEKAAPVMDRLHVWMIAQRDLVPEGSAISRALDYSLKRWAALSRYLDDGAVPIDNNWAENQIRPWALGRKNWLFAGSLRS
GKRAAAIMSLIQSARLNGHDPYAYLKDVLTRLPTQRASEIELLLPHKWQPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 4e-176 72
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 6e-142 53