Gene Information

Name : PSF113_3320 (PSF113_3320)
Accession : YP_005208715.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : integrating conjugative element membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3916206 - 3916577 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence :
ATGCTCAAGTGCATTCCCCCCCTAAAAAACAATCTCCGTGATGGTGCAAGCCAGCGCTTGATCGGTCTGCTGCTAGTACT
TGGTCCAAGCCTGGCTTTTGCCGAACTCCCGACCATGGAGGCTCCGTCACGTGGCGAAGGTTCCGGGTTGATCGAGACGA
TCAAAAACTACGCCTACGACGGCGGCATTCTCCTCGGCCTGCTGATCGCCCTGCTCGCTTTTCTCGGCGTAGCTTGGCAC
TCGCTGACCGTCTATGCCGACGTTCAGAACCAGCGCAAGACCTGGAAGGACTTGGGTGCGGTGGTCGGCATTGGAGCGCT
GCTGGTGGTGATCATCATCTGGTTCCTGACCAAGGCAGCCGCGATTCTATGA

Protein sequence :
MLKCIPPLKNNLRDGASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYDGGILLGLLIALLAFLGVAWH
SLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAAAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA39 ABD94648.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-08 54
RL028 AAP84155.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-09 54
ORF C53 AAN62147.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-09 49
ORF SG63 AAN62285.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-08 46
YpsIP31758_3711 YP_001402665.1 hypothetical protein Not tested YAPI Protein 0.016 45
api33 CAF28507.1 putative transmembrane protein Not tested YAPI Protein 0.011 45
YE3488 YP_001007647.1 hypothetical protein Not tested YAPI Protein 0.005 44