Gene Information

Name : PSF113_3318 (PSF113_3318)
Accession : YP_005208713.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3915147 - 3915788 bp
Length : 642 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCGCTTTCGAAACAAGGTCGATGCCCAACAGGCGCATATCTTCAGCCTGCGTTTGGCGGTAATGATCCTTGCCCT
GGTCTGTGCCGGGCTCTGGTACGGCTGGCGTTCGGCACCGACCGATCTGACCGTGCATGTACCACCAGATCTGCGCTCGG
GCAGCACTCGCAAGTGGTGGGATATCCCCTCAGAAAATATCTATGCCTTTGCCCTGTATATCTTTGGTCAGCTAAACCGC
TGGCCCTCGGATGGCGAGCAGGATTATCGCCGCGCCATCTATGGCTTGCAGTCCTACCTGACACCTGCCTGCAAAGCCTT
CCTCGACGGCGACTACGAATACCGCAAGGCCGCCGGTGAACTGCGCCAGCGAGTGCGCGGGGTCTACGAAATTCTGGGCC
GCGGTTACAGCGAAGATCCGGAACTCAGGGTCAAGCAACTCGACCGCGACAGCTGGCTGGTCACCCTCGACCTCAACGCT
GATGAATATTACGCCGCGGAACCGGTGAAACGGGTGGTGGTGCGCTATCCACTACGCGTGGTGCGGTTCGACCTCGATCC
CGAACACAACAAGTGGGGACTGGCGCTGGATTGTTATCAAGGCACGCCACAAAAAATCGCTCTGCCTGGAGGTGATTCAT
GA

Protein sequence :
MSRFRNKVDAQQAHIFSLRLAVMILALVCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWWDIPSENIYAFALYIFGQLNR
WPSDGEQDYRRAIYGLQSYLTPACKAFLDGDYEYRKAAGELRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVTLDLNA
DEYYAAEPVKRVVVRYPLRVVRFDLDPEHNKWGLALDCYQGTPQKIALPGGDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph80 CAI36121.1 hypothetical protein Not tested PPHGI-1 Protein 3e-55 61
ORF C51 AAN62145.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-58 60
ORF SG61 AAN62283.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-55 57
api35 CAF28509.1 putative exported protein Not tested YAPI Protein 3e-44 54
YpsIP31758_3709 YP_001402663.1 hypothetical protein Not tested YAPI Protein 5e-44 54
STY4568 NP_458653.1 possible exported protein Not tested SPI-7 Protein 2e-42 54
t4265 NP_807863.1 hypothetical protein Not tested SPI-7 Protein 2e-42 54
PMI2581 YP_002152300.1 hypothetical protein Not tested Not named Protein 2e-46 53
YE3486 YP_001007645.1 hypothetical protein Not tested YAPI Protein 3e-44 53
EXA37 ABD94646.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-41 53
Pmu_03110 YP_005176210.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-34 52
RL026 AAP84153.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-42 51
unnamed ABR13366.1 hypothetical protein Not tested PAGI-5 Protein 4e-42 51