Gene Information

Name : PSF113_3317 (PSF113_3317)
Accession : YP_005208712.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3914338 - 3915150 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGGATTTCTACCCCGGCGCTCACCATCGCACTGATGCTATGGGGAGTTGCAGCGCAGGCCGTCGAGTTGATGCG
CTGGGAACGCCTCCCTCTCGCGGTCCCACTGGTGATCAATCAGGAGCGGGTGGTCTTTGTCGATGAGGCTGTTCGCGTCG
GAGTGCCCTCAACCCTGACGGGCAAGCTGCGCGTGCAATCAACTGGCGGCACGCTGTACCTGCGGGCGTCGGAGGCCATC
GCCCCGACCCGCCTACAGCTGCAATCTGTCGCGACGGGAGAGATCATCCTCTTGGACATTGCGGCCACGCCTGGCGATCA
ACCGCTGGAACCCGTGCGTATTCTTAAGAATGCTCAGGAGCAGCCTACCGAGGCTGAATCCAGCACCGTCCCTGTTCCAG
AACGTACGCCAATCCCAGTCGCTTTGACGCGCTACGCCGCGCAAAGCCTGTATGCGCCGCTACGCACCGTGGAGTCCCTG
CCCGGCGTACGCCGCGTCCCGCTCAAGCTGCGCACCGAACTGCCAACCCTGCTGCCGATCGAACACGTGTCCAGCACGCC
CATCGCCGCCTGGCGACTCGGTGATTACTGGGTGACGGCCGTGAAGCTGCGCAATCGTGGTTCAGAGACGGTGCAACTCG
ATCCACGTCGACTCCAGGCCAAGCTATGCGCCGCGGCTTTCCAGCATGCTTTCCTCGGACCTGTCGGCAGCGCTGAAGAC
ACCACGATCGCCTACCTTGTCACCCGCAGTGTCGGCCTTGAGCAAGCCGTGCTGTTCCCGGCCGTTTCGCGAGGTGCTGG
CGATGAAAGCTAA

Protein sequence :
MKRISTPALTIALMLWGVAAQAVELMRWERLPLAVPLVINQERVVFVDEAVRVGVPSTLTGKLRVQSTGGTLYLRASEAI
APTRLQLQSVATGEIILLDIAATPGDQPLEPVRILKNAQEQPTEAESSTVPVPERTPIPVALTRYAAQSLYAPLRTVESL
PGVRRVPLKLRTELPTLLPIEHVSSTPIAAWRLGDYWVTAVKLRNRGSETVQLDPRRLQAKLCAAAFQHAFLGPVGSAED
TTIAYLVTRSVGLEQAVLFPAVSRGAGDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 8e-56 56
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 4e-60 54
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-60 54
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-58 54
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-60 53
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-61 52
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-54 51
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 7e-55 50
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 4e-58 49
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 4e-58 49
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 7e-55 49
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 4e-54 49
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-54 46