Gene Information

Name : PSF113_3316 (PSF113_3316)
Accession : YP_005208711.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3912831 - 3914348 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGCTAACGCCTTGCTCAAATGGCTGGTACCGGCTGCGCTGCTGGGCGTGGTGTTGATTATCCTGAAAACTTGGGT
CGGGGGTGGCAGCAGTTCCTCTCCAGAGAAGTCGGTTGATCAAGGCAATCTTCAGCTATCCGCCGAGCAAGCCAAGTCGC
TCGGTATTGCGGGCGATACCCCCCGCGATACGGTCGCCACCCTGGTCGGCCAGGTGAAGGCCATGCGCAGCGACATGCTC
GGTTTGAAGAAACACAACGATTCGCTGCAGACGGAAAACAACCGCCTGCGCGAGCGGGAAAACAATGTTGATTCGCGTAT
CCAGACGGCGCTTGGCAGCGTGACTCAACAGGTCGACGAAGGTCGACGACAAGCCAACGAGGCTCGACTCAAAGCGGAAC
AAGACAGTCGCCAGGCCCGTGGTCTGCTGACGCAATTGCAGGAGCAGCTGTCAGGGCTGACCGGCAAAGACAAGGATATG
CCTATCGGACTGGGGCTTGAGCCGGGCGACGGCTCCCAGTTCGAACGGCAGCATCCTGCCAATGATGCACTGCTGTGGAT
TGAGCCCTCGGATGCTCTGTCCACCGCCCCCCAGGGCAGAACCAAGACCGCGCCCACCCTGAGTCTGCCTACTGCCTTCA
ACACACTGGAGGGTTTGAAGGACAATGCCATCGACCGCAGCCAGAAGCAGTTACACGAGGTCACCAAGGGTGAACATGAC
CTGACACGCTCCGCTGATCGTACCGAAGGCGCGAAGCCGGTCTACACCATTCCCGAAAACGCAACATTGATGGGTTCGGT
CGCCATGACCGCGCTGATCGGCCGAGTCCCGGTGGACGGCACAGTGAATGATCCCTACCCCTTCAAGGTGTTGGTTGGCC
CCGAGAACCTGACCGCCAACGGCATCGAGCTGCCGGACGTCGCGGGGGCCGTTATGAGCGGCACGGCATCCGGTGACTGG
ACCCTGTCGTGCGTACGCGGACAGGTCGAGTCAATCACCTTTGTGTTTACTGACGGCACCATCCGCACGATGCCTCAGCC
GAAGGCAGTGGCCAGCCGCAATGCCTCCACCACCCAGAGCTCGAACACCGACAAGATTCGTGGCGGACTCGGTTACCTAT
CCGATCCATATGGCATCCCGTGCATTGCCGGCGAACGCCGCTCAAACGCTCAACAGTACCTCGGCAGCCAGAGTTTGATC
ACTGCCGCCGGCGCCAGTGTCGCCGCCTTGCTCGGGGATGAGCAGAACAACAGCAGCGTCATCAGTTCGGGCGGCAGTAC
GCTTGGGGTCACCAGCAGCAGTGGCAATAGCGCGCTGAATTCAATTCTCAGTGGTGGGGTCAGCGACATCCGCGGGTGGA
TCAACAAATTGTATGGCGAGACCTTTGCTGCCGTGTACGTGCCACCGGCCGCCCAAGTCGCGCTGCACCTCGACCATGAA
ATCACCATCGACTACGAGCCCAAGGGCCGGAGCGTACGCCATGAAAAAATCCACGTTTCCCTGCCTGACCTGGATTAG

Protein sequence :
MKANALLKWLVPAALLGVVLIILKTWVGGGSSSSPEKSVDQGNLQLSAEQAKSLGIAGDTPRDTVATLVGQVKAMRSDML
GLKKHNDSLQTENNRLRERENNVDSRIQTALGSVTQQVDEGRRQANEARLKAEQDSRQARGLLTQLQEQLSGLTGKDKDM
PIGLGLEPGDGSQFERQHPANDALLWIEPSDALSTAPQGRTKTAPTLSLPTAFNTLEGLKDNAIDRSQKQLHEVTKGEHD
LTRSADRTEGAKPVYTIPENATLMGSVAMTALIGRVPVDGTVNDPYPFKVLVGPENLTANGIELPDVAGAVMSGTASGDW
TLSCVRGQVESITFVFTDGTIRTMPQPKAVASRNASTTQSSNTDKIRGGLGYLSDPYGIPCIAGERRSNAQQYLGSQSLI
TAAGASVAALLGDEQNNSSVISSGGSTLGVTSSSGNSALNSILSGGVSDIRGWINKLYGETFAAVYVPPAAQVALHLDHE
ITIDYEPKGRSVRHEKIHVSLPDLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-91 51
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-93 50
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 1e-94 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-94 49
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 3e-93 48
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-90 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 6e-74 44