Gene Information

Name : PSF113_3300 (PSF113_3300)
Accession : YP_005208693.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3891104 - 3891979 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence :
GTGGCGCTGGACACCGTCAGCATCACCTCCTCCGTGCTTTCGCCAAACTGTCTCGAATACAGGGTCGTCGGCATTTGTTT
CTGGCTCCTCTGCACGCCCTTCGGCTGCACAGTCAAAACCTCGACCAAGGTTCGTCATTTCATTCCTGAGCTGGTGGTCT
CGAGTTACGCCGCCACCGGCAATAACCCCTGGACCGAGATGGCCACCCTATCCTCTCCCATCAGCGGCGCGGAGGGTGGC
GGCAACCTGATCACGCCGAACACCCGCCGCGACAACCTACCCCGCTTCAAGAACGTCGATGGCATCGGCCACCCCGGTGG
CTGGGTCGCAACGCAACTGGCTTCGCAGTCCGGCTATGCCTGCGCCACCGGCGCTACTGCGTTCATGCCCTACTACCTGA
GCACCCTGGACTCACTGGCATGGCGCCATGGCATACCGGAAAGTTTTTACCCCGAGTCGCTCATGCCGGGGATCCGTGAA
ATCGGTCGTCAAGCTTCGGGAAACATGTGGGGCAACGTTTATCCCAGGCAGGGCTTTCTGGTACAGCCCGACGATTTCAA
AGCGGCCGCAGTCATGGCGCAACGGGCCGGCGATGTGATTACCCGCAACTGGCAGCCGCATGTGTACTTACCACTCACGC
CCGCCAAACGCGACGGCTACTGGCCGCCTGGCCCGATCGTTGAAAACGATGCTTCGACCCACAAATGGCAATTGCTCTAC
CCCCAGGTGCAGCCCACGTGCGCCATCTTTCCCAGCGATCCGTTACAGAGCGCGGATGGCGGCTACGCCTGGTCGCTGTG
GCGTCCCTATAGCTGCTGCAAACGTGAGGGGCAGACCTTCCTGTTCAGCATCGACTTCGAAGGAGGTGCTTCATGA

Protein sequence :
MALDTVSITSSVLSPNCLEYRVVGICFWLLCTPFGCTVKTSTKVRHFIPELVVSSYAATGNNPWTEMATLSSPISGAEGG
GNLITPNTRRDNLPRFKNVDGIGHPGGWVATQLASQSGYACATGATAFMPYYLSTLDSLAWRHGIPESFYPESLMPGIRE
IGRQASGNMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNWQPHVYLPLTPAKRDGYWPPGPIVENDASTHKWQLLY
PQVQPTCAIFPSDPLQSADGGYAWSLWRPYSCCKREGQTFLFSIDFEGGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 8e-87 61
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 9e-89 61
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-84 61
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-82 59
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-82 59
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-81 58
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 4e-78 53
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 4e-78 53
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-73 52
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 1e-73 52
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 2e-73 52
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 2e-68 52
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 3e-59 48
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 1e-64 48