Gene Information

Name : PSF113_3299 (PSF113_3299)
Accession : YP_005208692.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3889725 - 3891107 bp
Length : 1383 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCGGCTTCTCGCGCGACCATGGTTGGGCGTGATGAGTCTGTTGCTCTACGGACTGCTCGCCATGGCCATGCATGC
CCACGCCGCCGACGGCGATTATCGCTTAGGTACTCAGGGCGAAGTACTCGACGACCGAGTGATGTACACCATCGGTGGCG
GCTCGGCAGTCGGCTCACCGAGTTCGCTCTACCGACCCAGCGGTCTCGGCGTCGGCGGGTCCTGGCGAGCAAACATGATG
TGCGGAAACATGAGCCTCACCCATACCCTGCAGAACCAGCTGAACGGCGCCACTGAAGGTTTCCAGCAGATCATGGGCAG
CATCGTGCAGAACGCGACCCAAGCCGTGATGTCGCTGCCGGCGTTGATCATCCAGCGCGCCAACCCCGGACTCTATGAGT
TGCTCAGTAACGGGGTGATGCAGGGGCGTATCGACTTCGACCGCTCCAAACTGACCTGCCAAGCCATGGCCGAAAAGATG
GCGGACAAGGTCGGTCAAGCCGGCTGGGGTGCGCTGGCCAAGAACCAGGAAATGCAAGGCAATTTGGAGCAAACCGGCGG
TGATGCGGTGGCCGCGGTGAAAAAAACCGAGACCCATAACGGCAACAATGGGGTGTCCTGGGTCGGCGGTTCGAAGGCGG
GGGGGAACGGGCAGACGCCCATTCGGGTGACCTCCGACGTGGTGCGCGCGGGCTACAACCTACTGCATAACCGGACGGTG
GATGACAGTGCCTCAATCAGTAGCAGCGACTGTTTGGGTGGGGCCATTTGCCAGACCTGGGCTTCGCCCCAGGAGGAATC
CGAATGGGCCGTTCGGGTGTTGGGCGAGAGCGAAGTCGCGACCTGCGACAGCTGCGAAACCCTGCGTGCTACCGCTGGCA
GTGGATTAACGCCGCTGATCCAGGAAGCCTACAGCGAGCGCCTCAAGGCCTTGCAAGAGCTGCTGTCTGGCTCACTGGCA
CCTACCCCTGACAACCTGGTGAAAGCCTCCAGCCCGATGCTGCCGGTGACCCGTGGTGTGATCGAAGCGCTGCGCGACGA
TCCCGACCAGGATCTGTTGGCACGGCGCCTGGCCAGTGAGACAGCCCTGTCCAGCGTGCTCGGCAAGGCGCTATTGCTAC
TGCGCACTCTGCTGGCGGGCAGCCACGAACCGAACATCGCCTCCGCCGAACCGGCCCAAACCGCCTTGACGAAAAACATC
GACGCTCTGGAGCGCGAAATCCGCCTGCTGCAGACAGAACTGCAGGTCCGGCAGATGCTGACCAACAATACCGCCAGCCT
GGTGCTCGATCGGCATGCCGGCGGTGCTGATGCTTCGCGCACCGTCGAGCAAGGCGACCCTGAGCCGGGCCGACTCAATG
ATGCTGACGCCAGGCGCAAGTGA

Protein sequence :
MSRLLARPWLGVMSLLLYGLLAMAMHAHAADGDYRLGTQGEVLDDRVMYTIGGGSAVGSPSSLYRPSGLGVGGSWRANMM
CGNMSLTHTLQNQLNGATEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKM
ADKVGQAGWGALAKNQEMQGNLEQTGGDAVAAVKKTETHNGNNGVSWVGGSKAGGNGQTPIRVTSDVVRAGYNLLHNRTV
DDSASISSSDCLGGAICQTWASPQEESEWAVRVLGESEVATCDSCETLRATAGSGLTPLIQEAYSERLKALQELLSGSLA
PTPDNLVKASSPMLPVTRGVIEALRDDPDQDLLARRLASETALSSVLGKALLLLRTLLAGSHEPNIASAEPAQTALTKNI
DALEREIRLLQTELQVRQMLTNNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADARRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-91 58
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-95 58
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 1e-95 54
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 8e-93 54
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 2e-94 54
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-95 54