Gene Information

Name : PSF113_3295 (PSF113_3295)
Accession : YP_005208688.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : dna primase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3885598 - 3886557 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGATATCTACCAAGACGTGACTGACAAGATCGTTACCGCTTTGGATCAAGGCGTTGCCCCCTGGATCAAACCCTG
GTCCTCAAGTGGCTCAGCTTGCATCGGTCATCAACCCTACCCCATCAACGCCATCACGCATCGTCCCTACTCGGGGATCA
ATTTACCGTTGCTCTGGGCCGAGGCTAGGTTGCAGGGGTTCACTCAAGATCGTTGGCTGACTTTCAACCAAGCCAAAAAA
GCCGGTGGGCACATCCGTAAGGGTGAGCACAGTACCCTAGCAGTGCTCTACAAGCCGATGGAGCGCGAGGAACAGACCGA
GTCAGGCCAACCCGTACTCGATGAAAACGGTCAGCCTAAGGTCGCTCATTTTGGCATTCTCAGGACACATTTTCTGTTCA
ACATCGAGCAAACGGAGGGGCTCGAAATGCTCAATGAAACCCTGCTCGAGACGGAACAGAGTGATCCCTTCCAGCCCAAC
AGCGTTGCGGAAAATCTGCTGTTAAGTTCAGGTGCACGCATCGTTCATCGGCCTGCCGACGAAGCCTTTTACCACCCGAT
CAGGGATCTCATCCAACTGCCGACAAAAGCACAATTTCACGATGAAGGCGGGTACTACGCCACGGCACTTCATGAGCTGA
CGCACTGGACCGGGCATCACTCTCGGTTGCAGCGCGAAGGCGTGACGTCAGCCTGTCCGTTCGGCTCGCCAGGCTACGCG
TTTGAGGAGTTGATCGCCGAGATGGGCGCTGCTTTTTTATGTGCCTACGCCGGTATACAGGGGGAGCTGCGGCACGAGGG
CTACATCGACTCCTGGCTCGGCCTGCTCAAGGCTGACAAACGCGCGATCTTTCGCGCCAGTGGTCACGCCCGCAGCGCGT
CGGAGTATGTGCTCAACCTGGAGCAGCAACTGAAGCAGATGGTAATGGATGACTCACGATGCATGATCGATAGAGTTTGA

Protein sequence :
MRDIYQDVTDKIVTALDQGVAPWIKPWSSSGSACIGHQPYPINAITHRPYSGINLPLLWAEARLQGFTQDRWLTFNQAKK
AGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDENGQPKVAHFGILRTHFLFNIEQTEGLEMLNETLLETEQSDPFQPN
SVAENLLLSSGARIVHRPADEAFYHPIRDLIQLPTKAQFHDEGGYYATALHELTHWTGHHSRLQREGVTSACPFGSPGYA
FEELIAEMGAAFLCAYAGIQGELRHEGYIDSWLGLLKADKRAIFRASGHARSASEYVLNLEQQLKQMVMDDSRCMIDRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3460 YP_001007622.1 hypothetical protein Not tested YAPI Protein 3e-60 46
api91 CAF28565.1 hypothetical protein Not tested YAPI Protein 1e-59 45
YpsIP31758_3690 YP_001402644.1 antirestriction protein Not tested YAPI Protein 1e-59 45
PMI2554 YP_002152273.1 DNA primase Not tested Not named Protein 7e-59 44
unnamed AAP70295.1 antirestriction protein Not tested HPI Protein 1e-48 42
Pmu_02920 YP_005176191.1 hypothetical protein Not tested ICEPmu1 Protein 3e-54 41