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Name : oppB (PSF113_3274) Accession : YP_005208668.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein OppB Function : - COG functional category : - COG ID : - EC number : - Position : 3858590 - 3860188 bp Length : 1599 bp Strand : - Note : Oligopeptide transport system permease protein OppB DNA sequence : ATGAAGCAGAACCTTGAGATGAGCGACAACCTGATCGAAATCCGCGACCTGAGCGTGGCCTTCAACGACCAGACGGTGGT GCGCAACCTGTGCCTGGACATCCGCCCCGGCGAATGCCTGGCCCTGGTGGGCGAGTCCGGCTCCGGCAAGTCGGTGACGG CCCACTCGATCCTGCAATTGCTGCCCGAGACCGAAGCCCGCACCACCGGCAGCATTCGCTATCGCGGCCAGGAACTGCTG GGTGCCGATCCCACGGCCCTGCGGGAGTTACGCGGCAATCGCATCGCGATGATCTTCCAGGAGCCGATGACCTCGCTGAA CCCGCTGCACAGCGTCGAGAAGCAGATCGGTGAAACCCTGATGCTGCACCGGGGCCTGGGCGGCAAAGCGGCGCGCCAGC GCATTCTGGAACTGCTGGCCCTGGTGGGCATCCAGAAACCTGCCGAACGCCTCAAGGCCTATCCCCATCAACTGTCCGGC GGCCAGCGCCAACGGGTGATGATCGCCATGGCCCTGGCCTGCGAGCCGGAGCTGTTGATTGCCGACGAACCGACCACCGC GCTGGACGTGACCGTGCAGCGCAAGATCCTGCTGCTGCTCAAGTCCTTGCAGCAACGGCTCGGCATGTCCTTGCTGCTGA TCAGCCACGACCTCAACCTGGTGCGCAGCATCGCCCAACGGGTGTGCGTGATGAAGGCGGGGGAAATCGTCGAACAGGCA CCTTGCGAAACCCTGTTCAGCACACCGAAACATCCCTACAGCTGCGAGCTGCTGCACGCCGAACCGGAAGGCGAAGCCCT GCCCCGGGACGAGCGCGAAAATGTGTTGCAAGTGCAGGACCTGCGCGTGAGTTTTCCCTTGGGCGGCGGGCTGTTCCGGC GCAAGGAATACTTGCGCGCCGTGGACGGCATCAGCCTGAGCATCCAGCGCGGCAAGACCCTGGGCATCGTCGGCGAATCC GGTTCCGGCAAGTCCACGCTCGGCCAGGCGATCCTGCGCCTGATCGACTCCGAAGGCAGCATCCACTTCCAGGGCCAGGC CCTCGATCAGCTGTCGCACAAGGCACTGCGGCCATGGCGCAAGCAGATGCAGGTGGTGTTCCAGGACCCGTTCGGCAGCC TCAGCCCGCGCATGTCGGTACAGCAGATCATCAGCGAAGGTCTCGAGGTCCACCAGCCTTCCAGCGCCGAACAATGTGAA GCCCGGGTGATCCAGGCCCTCAAGGAGGTCGGCCTCGACCCTTCGACCCGTCATCGCTACCCCCACGAATTCTCCGGCGG CCAGCGCCAGCGCATCGCCATCGCCCGGGCCTTGGTGCTCAAGCCAGCGTTGATTTTGCTGGACGAACCCACCTCGGCAC TGGACCGCACCGTGCAGAAACAAGTCGTCGCCCTGCTCCGTCAGCTCCAGGAGAAGTACGACTTGACCTACCTGTTCATC AGCCACGACCTGGCGGTGGTCCGTGCCTTGGCCCACGACATGATCGTGATCAAGGACGGCAAAGTGGTCGAGCAAGGCGC CAGCCATGACGTGTTCGACTCGCCCCAGCATCCCTATACCAAGGAGTTGTTGGCGGCGGCGCATCCGGGGTGGGCATAA Protein sequence : MKQNLEMSDNLIEIRDLSVAFNDQTVVRNLCLDIRPGECLALVGESGSGKSVTAHSILQLLPETEARTTGSIRYRGQELL GADPTALRELRGNRIAMIFQEPMTSLNPLHSVEKQIGETLMLHRGLGGKAARQRILELLALVGIQKPAERLKAYPHQLSG GQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMKAGEIVEQA PCETLFSTPKHPYSCELLHAEPEGEALPRDERENVLQVQDLRVSFPLGGGLFRRKEYLRAVDGISLSIQRGKTLGIVGES GSGKSTLGQAILRLIDSEGSIHFQGQALDQLSHKALRPWRKQMQVVFQDPFGSLSPRMSVQQIISEGLEVHQPSSAEQCE ARVIQALKEVGLDPSTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRQLQEKYDLTYLFI SHDLAVVRALAHDMIVIKDGKVVEQGASHDVFDSPQHPYTKELLAAAHPGWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-96 | 43 |
