Gene Information

Name : exaC (PSF113_2975)
Accession : YP_005208374.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein ExaC
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 3504701 - 3506221 bp
Length : 1521 bp
Strand : -
Note : Aldehyde dehydrogenase

DNA sequence : 
ATGATCTACGCACAACCCGGAACCCCAGGCGCCGTCGTTACCTTCAAGCCGCGTTATGGCAACTTCATCGGCGGCGAATT
CGTCGCACCGGTCAACGGCGAGTACTTCACGAACAGCTCCCCGGTCAATGGCGAAGTCATTGCCGAATTCCCGCGCTCCA
GCGCCGCCGACATCGACAAGGCACTGGATGCCGCCCACGCCGCAGCTGATGCCTGGGGCAAGACCTCGGTGCAGGACCGT
TCCCTGGTGCTGCTGAAAATCGCCGACCGTATCGAGCAGAACCTGGAAATCCTCGCTGTCAGCGAAACCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTCAATGCCGACGTGCCGCTGGCGGCCGACCATTTCCGTTATTTCGCCGGCTGCATCCGCG
CCCAAGAGGGTGGGGCGGCCGAGATCAACGAATTGACCACGGCCTATCATTTCCACGAGCCGCTGGGTGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGTTGCTGATGGCCGCCTGGAAACTCGCCCCGGCCCTGGCTGCGGGTAACTGCATCGTGCT
CAAGCCGGCTGAACAGACGCCGCTGTCGATCATGGTCTTCATCGAGCTGGTCGCGGACCTGCTGCCGCCCGGCGTGCTGA
ATATTGTCCATGGTTTCGGTCGCGAAGCCGGTGAAGCCCTGGCTACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCCACCCCGGTGGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCCACCGTGGAACTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCGGCCTTCATCGAGAAAGCCGCCGAAGGCCTGGTACTGGCGT
TCTTCAACCAGGGCGAAGTCTGCACCTGCCCATCTCGCGCCCTGGTGCAAGAGTCGATCTACGTGCCGTTCATGGCCGAG
GTGATGAAAAAAATCGCCAAGATCAAGCGTGGCAACCCGCTGGACACCGAAACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAATTCGATAAGATCCTTTCGTACCTTGAAATTGCCCAGCAAGAGGGCGCCGAGTTGCTCACTGGCGGTGCTGCCGAGC
GACTTGAGGGGGATTTGTCGAGCGGCTATTACATCCAGCCGACCCTGCTCAAGGGCCACAACAAAATGCGCGTGTTCCAG
GAAGAGATCTTCGGCCCGGTAGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCCCTGGCAATCGCCAACGACACCGA
GTTCGGCCTCGGCGCCGGCCTGTGGACCCGCGACATCAACCGTGCCTACCGCATGGGCCGGGCGATCAAGGCCGGTCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCACGCCGCGTTTGGTGGCTACAAGAAATCTGGCGTGGGACGTGAAACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGTTGGGGTTCTTCTA
A

Protein sequence : 
MIYAQPGTPGAVVTFKPRYGNFIGGEFVAPVNGEYFTNSSPVNGEVIAEFPRSSAADIDKALDAAHAAADAWGKTSVQDR
SLVLLKIADRIEQNLEILAVSETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINELTTAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCIVLKPAEQTPLSIMVFIELVADLLPPGVLNIVHGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYVPFMAE
VMKKIAKIKRGNPLDTETMVGAQASEQQFDKILSYLEIAQQEGAELLTGGAAERLEGDLSSGYYIQPTLLKGHNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-147 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-154 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-154 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-154 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-154 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
exaC YP_005208374.1 protein ExaC VFG0082 Protein 6e-148 66