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Name : PSF113_2845 (PSF113_2845) Accession : YP_005208244.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : dTDP-glucose 4,6-dehydratase Function : - COG functional category : - COG ID : - EC number : 5.1.3.- Position : 3354845 - 3355816 bp Length : 972 bp Strand : + Note : - DNA sequence : ATGAGAGTACTGGTCACCGGCGTCGCAGGGTTCATCGGATTTCATACCGCCAAGCGGCTGTGCAACGATGGCCATCAGGT CATTGGTATCGACAACCTCAGCAGCTACTACAGCGTCGAACTGAAACATGCGCGACTGGCGCAGTTGATCGAATGCCGCG ATTTCCACTTTCAGTTGCTGGATGTGGAAGACAAACAGGCACTGTTGGAGTTGTTTGCCGAACATGCCTTCGATCACGTC GTCCACCTTGCTGCCCAAGCCGGCGTGCGCTATTCCATCGACAACCCGGACGTTTATGCGCAAAGCAACCTGGTGGGCTT CCTCAACGTGTTGGAAGCCTGCCGTGCCCAACGACCGGCGCACCTGGTGTTCGCCTCGAGCAGTTCGGTGTATGGCTTGA ACAACCGCCTGCCGTACGCCACGACCGACCCTGTCGATCAGCCCGTATCGTTCTATGCGGCGACCAAGCGCGCCAATGAG CTGATGGCCCACGCTTACTCGCACCTCTATGGCATTCCCACCACCGGCCTGCGGTTTTTTACCGTGTATGGACCTTGGGG ACGGCCCGACATGGCGCCGTTCAAATTCACCGATGCGATCCTCAACGGTCGCGCCATCGACGTTTATAACGACGGTGCGA TGTCTCGCGATTTCACCTATATCGACGACATCGTCGAGGGCCTCGTGCGGCTGATACCGCTGCCGCCGACCAATGGGACC GGCGTGCGCAACAAGGTCTACAACATCGGTTTCGGCTCACCGGTGAAGCTTTTGCAGTTTATCGAGTGCATTGAAGAAGC ACTGGGCATCCCCGCGCTAAAGCGTTTCTTGCCGTTGCAACCGGGCGACGTGGTCGACACATGGGCGGACACGCGCGAGC TGGAGGATCACGTGGGGTTTCGCCCGCAGGTCGCAGTACCCGTTGGCGTGCAGTCGTTTGTCGATTGGTATCGCGCGTAT TACCACGTTTAA Protein sequence : MRVLVTGVAGFIGFHTAKRLCNDGHQVIGIDNLSSYYSVELKHARLAQLIECRDFHFQLLDVEDKQALLELFAEHAFDHV VHLAAQAGVRYSIDNPDVYAQSNLVGFLNVLEACRAQRPAHLVFASSSSVYGLNNRLPYATTDPVDQPVSFYAATKRANE LMAHAYSHLYGIPTTGLRFFTVYGPWGRPDMAPFKFTDAILNGRAIDVYNDGAMSRDFTYIDDIVEGLVRLIPLPPTNGT GVRNKVYNIGFGSPVKLLQFIECIEEALGIPALKRFLPLQPGDVVDTWADTRELEDHVGFRPQVAVPVGVQSFVDWYRAY YHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-84 | 53 |
