Gene Information

Name : PSF113_2635 (PSF113_2635)
Accession : YP_005208037.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : Thiol peroxidase, Tpx-type
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.5
Position : 3100995 - 3101495 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTCACCCTCAAAGGCAACCCGGTCCAAGTCAACGGCCAGTTGCCACAAGCCGGTTCCAAGGCACCAGCCTT
TTCTCTGGTTGCCGGCAATCTGTCGGATGTTTCCCTGAAGGACTTCGCCGGCAAGCGCAAAGTGCTGAACATTTTCCCAA
GTGTCGACACGCCGACCTGCGCCACCTCCGTGCGCAAGTTCAATGCCCAGGCCAACGAGCTGAACAACACCGTGGTGCTG
TGCATCTCCGCCGACCTGCCATTTGCCCAGGCGCGTTTCTGCGGTGCCGAAGGCCTGGACAACGTCCAGAACCTGTCGAC
CCTGCGCGGTGCCGAGTTCATCCAGGACTACGGCGTGGCAATCGCTGATGGCCCGCTCAAAGGCCTGACCGCCCGTGCCG
TGGTGGTGCTGGACGAAAACGATACCGTGCTGCACAGCGAGCTGGTCAAGGAAATTGGTGAAGAGCCGAACTACGATGCT
GCGTTGGCCGTTCTGAAATAA

Protein sequence : 
MAQVTLKGNPVQVNGQLPQAGSKAPAFSLVAGNLSDVSLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELNNTVVL
CISADLPFAQARFCGAEGLDNVQNLSTLRGAEFIQDYGVAIADGPLKGLTARAVVVLDENDTVLHSELVKEIGEEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-36 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-37 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-36 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_2635 YP_005208037.1 Thiol peroxidase, Tpx-type VFG0087 Protein 3e-37 47