Gene Information

Name : PSF113_2543 (PSF113_2543)
Accession : YP_005207945.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Resistance
Product : 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2995689 - 2996111 bp
Length : 423 bp
Strand : +
Note : -

DNA sequence :

ATGCCCAAGCTGCGCCAATCCTTGACCCTGACCCTGCTCCAGGCCCGTGAAGCGGCCATGGGGTTTTTCCGGCCTTCCCT
CAATCAACATGGCTTGACCGAGCAGCAATGGCGGGTCATCCGTATTCTCAGCCAGCACGACGAGCTGGAGATCAATCGCC
TGGCCGAATTGGCCTGCATCCTCAAGCCCAGCATGACCGGCGTGTTGGTGCGCATGGAAGCGGCGGGCATGGTGGTGCGG
CGCAAGGCTGAACAGGATCAGCGGCGAGTGCTGGTGCGCCTGGCGCCGCAAGGGCAGGCGAGCTTCGATTCGATGAGCCA
GAGCATGGAAGAGAATTACCAGCGTCTGCAGGACAAGTTAGGGGAGGAAAAATTGCAGACGTTGCTGGGGTTGCTTAATG
ACCTGAAGGCGATCAGGCGCTGA

Protein sequence :

MPKLRQSLTLTLLQAREAAMGFFRPSLNQHGLTEQQWRVIRILSQHDELEINRLAELACILKPSMTGVLVRMEAAGMVVR
RKAEQDQRRVLVRLAPQGQASFDSMSQSMEENYQRLQDKLGEEKLQTLLGLLNDLKAIRR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hpcR	AAO17176.1	HpcR	Not tested	tcd island	Protein	2e-31	46

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PSF113_2543	YP_005207945.1	5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase	BAC0505	Protein	3e-28	46