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Name : tnpC1 (PSF113_0024) Accession : YP_005205454.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein TnpC1 Function : - COG functional category : - COG ID : - EC number : - Position : 25590 - 27194 bp Length : 1605 bp Strand : + Note : Putative transposase, tnpC DNA sequence : GTGGCCTGCTTTGGTAAAATCCACGGCATGACGTCCTCACCCAATCTCGATCAAATGACTCCCGACCAGCTACGTGCATT CGCTGCGCAGTTGCTGTCGCAAGTCGAGACCCTGGGCAAGACGGTTGAAACCATGGGCAAGACAGTTGACACCATGGGCA AGAAGATCAACCGCGATCAAACGGTGATCGAGAAACTGACCCACGAAATCGCGCAACTCAAGCGTTTGAAGTTTGCCAAG CGTAGCGAGCAGATGAATCCTGAGCAGGCCAGTCTGCTCGATGACCTGATCGATACCGATATCGCGGCGATTGAGGCCGA GCTTCAAGCCTTGCAAATAGCGCCAGCGACGACCGAGAAAAAGCAAAAGCCCAAGCGCACGGCATTGCCGGCGGAATTCC CACGCACGTTGATCCATCATGAACCGGACAACACTCGCTGCCCTTGTGGCTGCGCACTCAAGCGTATCGGTGAAGACGTC AGCGAAAAGCTGGACTACACACCCGGCGTGTTCACCGTCGAACGCCATGTTCGTGGCAAGTGGGTTTGCGATGACTGCGA AACGCTGATCCAAGCGCCCGTACCGGCGCAGGTCATCGACAAAGGTATCCCAACGGCAGGCTTACTTGCCCACGTCATGA TCGCGAAGTTCGCTGACCATTTGCCGCTCTACCGCCAGGAATCGATTTTCGGTCGCGCCGGCTTGGCGATTCCACGCTCC ACTTTGGCTCAATGGGTTGGAATGACGGGTGTGCAATTACAGCCCCTGGTCGATGCCCTGCGTGACGTAGTGATGGGACA GCAAGTCATCCACGCGGATGAAACACCGGTACAGATGCTTGCTCCAGGTTCGAAGAAAACCCACCGGTCTTATGTTTGGG CTTACGCCACGAGCCAGTTCTGCGAAACAGCCGCTGTCGTCTACGACTTCAGCCCCAGCCGCGCCGGTGAGCATGCTCGC AACTTCCTGCAAGGCTGGAAAGGTAAGTTGGTCTGCGACGACTTTGGCGGTTACAAGGCCAGCTTCGAACTCGGCGTGAC CGAGATCGGCTGCATGGCCCATGCCCGACGCAAGTTTTTCGAATTGCACGCGACCAACAAAAGCCAGATCGCCGAGCAGG CCCTGCGCTACATCCAGTTGCTGTACGAAATCGAGAGCGAAGTGCGTGATCTGGAACCGGATTTACGGTGCCGAATACGA CAAGAAAAAGCCGCTCCGGTGATGGATAGATTGCATGTCTGGATGATCGCCCAGCGTGATCTTGTGCCCGAAGGTTCGGC CATCAGCAGAGCACTCGATTACAGTCTCAAACGCTGGGCAGCGCTGTCGCGCTACCTCGATGATGGGGCCGTCCCCATTG ATAATAACTGGGCGGAGAACCAGATCCGGCCGTGGGCTCTTGGACGCAAAAACTGGCTCTTCGCTGGGTCGCTACGTAGC GGAAAACGGGCGGCAGCGATCATGAGTTTGATCCAGTCTGCGCGGCTGAATGGTCATGACCCGTACGCCTATCCTAAAAG GGATCGGTTTACTCTCACGCGTTTACCGACGCAGCGGGCGAGTGAAATCGAGCTGCTGCTTCCGCATAAGTGGCAGCCGG TTTAA Protein sequence : MACFGKIHGMTSSPNLDQMTPDQLRAFAAQLLSQVETLGKTVETMGKTVDTMGKKINRDQTVIEKLTHEIAQLKRLKFAK RSEQMNPEQASLLDDLIDTDIAAIEAELQALQIAPATTEKKQKPKRTALPAEFPRTLIHHEPDNTRCPCGCALKRIGEDV SEKLDYTPGVFTVERHVRGKWVCDDCETLIQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGLAIPRS TLAQWVGMTGVQLQPLVDALRDVVMGQQVIHADETPVQMLAPGSKKTHRSYVWAYATSQFCETAAVVYDFSPSRAGEHAR NFLQGWKGKLVCDDFGGYKASFELGVTEIGCMAHARRKFFELHATNKSQIAEQALRYIQLLYEIESEVRDLEPDLRCRIR QEKAAPVMDRLHVWMIAQRDLVPEGSAISRALDYSLKRWAALSRYLDDGAVPIDNNWAENQIRPWALGRKNWLFAGSLRS GKRAAAIMSLIQSARLNGHDPYAYPKRDRFTLTRLPTQRASEIELLLPHKWQPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 1e-172 | 71 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 2e-138 | 53 |
