Gene Information

Name : PSF113_2487 (PSF113_2487)
Accession : YP_005207889.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2929362 - 2930852 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGAACCCGATTCAATTGTTACCTGCCGTCGAGAAGTTCCTGTCGCAACCGAGTCGGCTGTTTATCGGTGGCACTTGGCA
GGATGCCGCCGATGGCCGTCGGTTTGCCGTGGAAAACCCGGCCACTGAACACACCCTGGCGGAAGTCGCCGAAGGCGGCG
AGCGCGACGTCGATGCCGCCGTCGCTGCCGCCCGCGCGGCCTTCACCGGGCCCTGGGCGCAGCACTCACCGGCCCAGCGC
GGGTTGTTGCTGTTTCGCCTGGCGGAACTGCTCGACCAGCATCGCGAAGAGCTGGCGCAACTGATCACCCTGGAAAACGG
CAAGCCGATCGGCGCGGCCCGGGGCGAAGCGGCCAGTGCGGCCAATATCATTCGTTATTTCGCTGGCTGGCCGACCAAGA
TCGAAGGCAGCACGCTGCCGGTATCGCCCTCCAGCGGCGCACCGATGCTCAACTACACCTTGCGCGAGCCGGTGGGCGTC
TGCGCCTTGATCGTGCCGTGGAACTTCCCGCTGACCATGTGCGTGTGGAAGCTTGGCCCGGCGCTGGCGACCGGTTGCGT
CGCGGTGCTCAAGCCCGCCGAGCAGACGCCCCTGGTTGCGATTCGCCTGGTGCAGTTGATCGAGGCCGCCGGTTTCCCGG
CTGGGGTGGTCAACCTGCTCACCGGCCTCGGCGTGCATACCGGCGCACCGCTGGCCCAGCACCCGGACGTGGACAAGATC
GCCTTCACCGGTTCGACCCAGGTGGGGCGGCTGATCGCCCAGGCGGCCACCGGCAACATGAAGAAGGTCTCCTTGGAACT
GGGTGGCAAGTCCCCCAACATCATCCTGCCGGACGCCGATATCGTCCGTGCCGCCAAGGGCGCCGCCGACGGTATTTTCT
ACAACCAGGGGCAGGTCTGCACCGCGGGATCGCGTCTGTACGTGCACGCCAGCGTTCTCGATCAGGTGCTTGAAGAACTC
CAGCGCCACGCCGCCGCCCATGTGTTGGGGCCAGGCCTGGATCCGGCCAGCAGCATGGGCCCGCTGGTCTCGGCCCGGCA
ATTGGGCACGGTGCGTGGCTACCTGCAACGGGGCCAGGAAGAAGGCGCCGAGCTGATCTGCGGCGGTGACCGGCCGGCCC
ACCTGGAGCGCGGCCACTTCATCCGGCCCAGCGTGTTTCTCGACCGCGCCGAGCGCGCCTGTGTCGCCCGGGAAGAAATC
TTCGGCCCGGTGCTGACCGTCATGAGCTGGACCGAGATCGATGAACTGGTGCTGCGCGCCAACGACTCGCCCTATGGCCT
GGCCGCCGGTCTCTGGACCCGTGACTTGCGTTCCGCCCATCGCGTGGCCGCTCAGTTGAAGGCCGGCTCGGTGTGGATCA
ACTGCTGGAACGTCGTCGACCCGGCCTCGCCATTTGGTGGTTACAAGCAATCCGGCTGGGGCCGGGAAATGAGTAAGAAC
GTGATCGATGCCTACACCGAAACCAAAAGTGTCTTCGTCGATCTTGCCTGA

Protein sequence :
MNPIQLLPAVEKFLSQPSRLFIGGTWQDAADGRRFAVENPATEHTLAEVAEGGERDVDAAVAAARAAFTGPWAQHSPAQR
GLLLFRLAELLDQHREELAQLITLENGKPIGAARGEAASAANIIRYFAGWPTKIEGSTLPVSPSSGAPMLNYTLREPVGV
CALIVPWNFPLTMCVWKLGPALATGCVAVLKPAEQTPLVAIRLVQLIEAAGFPAGVVNLLTGLGVHTGAPLAQHPDVDKI
AFTGSTQVGRLIAQAATGNMKKVSLELGGKSPNIILPDADIVRAAKGAADGIFYNQGQVCTAGSRLYVHASVLDQVLEEL
QRHAAAHVLGPGLDPASSMGPLVSARQLGTVRGYLQRGQEEGAELICGGDRPAHLERGHFIRPSVFLDRAERACVAREEI
FGPVLTVMSWTEIDELVLRANDSPYGLAAGLWTRDLRSAHRVAAQLKAGSVWINCWNVVDPASPFGGYKQSGWGREMSKN
VIDAYTETKSVFVDLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-77 47
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-64 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_2487 YP_005207889.1 aldehyde dehydrogenase VFG0082 Protein 6e-69 41