Gene Information

Name : fecD (PSF113_2450)
Accession : YP_005207852.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein FecD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2869614 - 2870675 bp
Length : 1062 bp
Strand : -
Note : Iron(III) dicitrate transport system permease protein FecD

DNA sequence :
ATGAGCTCGTTGAACGAAACCCTGGTGGTTCAACGCGACACCTACCGGCGCCTGGTACTGCGCAAGCGCCTCATCCTCGG
TGGGCTCGCGCTGCTGCTGATCTGCAGCGTCCTGCTCGACCTGGCCCTCGGGCCGGCGCGCTACAGCCTCGACGAGGTGC
TCGGCGCACTGTTTTCGCCAGACAGCGCATCGCCCCAGGTGCGTGTGGTGATGTGGGACATCCGTTTGCCCGTGGCGCTG
ATGGCCGTTGCGGTCGGCGCCGCGTTGTCGCTGGCCGGCGCGCAGATGCAGACGATCCTCAACAACCCGCTGGCCAGCCC
GTTCACCCTGGGCATTTCCGCCGCCGCCAGTTTCGGTGCGGCCATGGGGCTGGCGTTTGGCGTGGCCCTGTTCCCGCTGG
CGGCACAGTACATGGTGCCGGTGAATGCGTTCATCATGGCCATGCTGTCGGCCTTGCTGATCCACTTCCTGAGCCTGCGC
CGCGGTGTCAGCGCCGAGACCATCGTGCTGCTCGGCATCGCCCTGGTGTTCACCTTCAACGCGCTGTTGGCGCTGGTGCA
ATTCTTCGCCACCGAACAAGCCGTGGCCGCCGTGGTGTTCTGGACGATGGGCAGCCTGACCAAAGCCACCTGGCCCAAGC
TCGGGGTGATCTGCCTGGTGATCCTGGTCACCCTGCCGATTTTCGCCCGACGCGCCTGGGCCTTGACCGCGCTGCGCCTG
GGGGATGACAAGGCCGCGAGTTTCGGCATCAACGTGCGCAGCCTGCGCTTCCAGACGCTGATCATGGTCAGCCTGCTGGC
CTCGTTCCCGGTGGCGTTTGTCGGCACCATCGGCTTCATCGGGCTGGTTGGCCCGCACATCGCGCGGATGCTGATCGGTG
AAGACCAGCGATTCTTCCTGCCAGCGTCCTTGTTGACCGGCGCATTGATTCTGTCCGCCAGTTCGGTGATCAGCAAAACC
CTGATCCCCGGCGCCATTTTCCCCATCGGCGTGGTCACGTCGCTGATCGGCGTGCCCTTCTTCGTTTCCTTGATTCTCGG
TGGGAAGAAAAACTCATGGTAA

Protein sequence :
MSSLNETLVVQRDTYRRLVLRKRLILGGLALLLICSVLLDLALGPARYSLDEVLGALFSPDSASPQVRVVMWDIRLPVAL
MAVAVGAALSLAGAQMQTILNNPLASPFTLGISAAASFGAAMGLAFGVALFPLAAQYMVPVNAFIMAMLSALLIHFLSLR
RGVSAETIVLLGIALVFTFNALLALVQFFATEQAVAAVVFWTMGSLTKATWPKLGVICLVILVTLPIFARRAWALTALRL
GDDKAASFGINVRSLRFQTLIMVSLLASFPVAFVGTIGFIGLVGPHIARMLIGEDQRFFLPASLLTGALILSASSVISKT
LIPGAIFPIGVVTSLIGVPFFVSLILGGKKNSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 6e-50 54
irp6B YP_005124376.1 membrane protein permease Irp6B Virulence Not named Protein 3e-49 51
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 5e-50 51