Gene Information

Name : PSF113_0242 (PSF113_0242)
Accession : YP_005205668.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 295043 - 295489 bp
Length : 447 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATCGGAGAACTGGCGAAAATCACCGACTGCCAGGTCGAAACCATCCGCTACTACGAGCGCGAAGGCCTATTGCC
GGAACCGGCCCGCAGCGACGGCAATTACCGCGTCTACACCCAGGCCCATGCCGAACGGCTGACGTTCATCCGCAACTGCC
GCACCCTGGACATGACCCTGGAAGAAATCCGCAGCCTCCTGGCCCTGCGCGACAGCCCCCAGGACCAGTGCGAAAGCGTC
AACGCGCTGATCGACGAACACATCCAACACGTCAAGGCCCGCATCGACGGCCTGCTGGCCTTGCAGACGCAACTGATCGA
CCTGCGCCATCGTTGTGGCGAAGGGCCGGACCTGGATCAATGCGGGATCTTGCAGCGGTTGGAGGTGAGCGGGGCGGTGG
CGCCGGAGGTGGAGCATTCCCATGTGGGGCGTAGTCATGGGCATTGA

Protein sequence : 
MKIGELAKITDCQVETIRYYEREGLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTLEEIRSLLALRDSPQDQCESV
NALIDEHIQHVKARIDGLLALQTQLIDLRHRCGEGPDLDQCGILQRLEVSGAVAPEVEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-35 54
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-34 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-34 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-34 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-34 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-34 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 3e-34 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 3e-34 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_0242 YP_005205668.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 2e-52 79
PSF113_0242 YP_005205668.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 3e-32 56