|
Name : clpB (PSF113_2411) Accession : YP_005207815.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : 3.6.1.15 Position : 2810386 - 2812929 bp Length : 2544 bp Strand : - Note : ClpB protein DNA sequence : ATGGAACTGGCCAGCCTGATCGGACGCCTCAACCCGGACAACCGCCGCGCCCTGGAACGGGCCGCGCAACGCTGCATGCA GCGCAGCCATCACTATGTGGAAATCGAACATCTGCTGTTGGAATTGCTCGACATCGAGGGCGGCGACTTTGCCTGCCTGC TGCCGCGCTTCGGGCTGGAGCGTGACGCGGTGGCGACGGAAACCAACAAGGCCCTGGACCTGTTCAAATCCGGCAGCACC CGCACGCCCGCCTTGTCGGCACAAACCATCGGCCTGTTGGAAGACGCCGTGGTCCAGGCCAGTGTGCTGGGCCTGGACAG CATCCGCTCCGGGCTGTTGCTATTGGCGCTGCTGGACCGTGATGAGCGCCGCAGCCTGCTGCTCAACAGTGCCTCGTCGT TGCTGCGCATTCCCCGCGACGCCCTGCGCGCCCACCTATTGGAGTGGACCGAAAGCTCCCGTGAACATGTCGGTGGCGTG CGCCCGACCAAACCCGGCGAGCCACCCCAGAAACAAGACCCGGTGCTGGACCAGTACACCCAGGACCTGACAGCCGACGC CCGGGCCGGGCGCATCGACCCCATCGTTGGCCGCGACGGCGAGATCCGCCAGTGCATCGACATCCTGCTCCGGCGCCGGC AGAACAACCCGATCCTGGTCGGCGCACCGGGCGTCGGCAAGACTGCGGTGGTGGAAGGCCTGGCCCTGCGTATCGCCGCC GGGGATGTGCCGCCGTCGTTGCAGGAAGTCACCCTGCGTGTCCTCGACCTGGGCCTGTTGCAGGCCGGTGCCGGCGTCAA AGGTGAATTCGAACAGCGCCTCAAGGGTGTGATCGACGCGGTACGCAGTGCCGAAAAGCCGATCATCCTGTTCATCGACG AAGCCCATACGCTGATCGGCGCCGGCGGTGCGGAAGGCGGCAGCGATGCGGCCAACCTGCTCAAGCCCGCCCTGGCCCGG GGCGAACTGCGCACCCTGGCCGCAACCACCTGGCTGGAATACAAAAAATATTTCGAGAAAGACCCGGCCCTGGCCCGCCG CTTCCAACTGGTACAGGTCGAAGAACCGGACGAACTCACCGCCGTGGAAATGCTCCGGGGCGTGGCCAGCAAACTGGAAC AGCACCACGGCGTGCAGGTGCTGGACGCGGCCATCCACGAGGCAGTGAAGCTGTCCCACCGCTACATCTCCGGGCGACAG TTGCCGGACAAGGCCATCAGCGTGCTCGACACCGCCTGCGCCCGGGTCGCCCTCGGCCAGCACGACGTACCGCCGCCGCT GGAAAGCCTGCGCCATCGGCAGAACAGCCTCAAGGACGAGGTCGAACGCCTGCGCCGGGAACAGGCGACCGGGCTCGATC ACCGCGAGCGCATAACCCTGCTCGAAGGCGAATCGACCAGCAACGTGCAAGCCATCCGCGAACTGGAAACCCGCTGGGGC GAAGAGCGCGAAGCCGTGCGCGAACTGCTCGACACCCGGCGCGAACTGCTTGCCCTGAGCGAACGCGCCGACAGTGAAAA AGCCGACACCGAGATCGATAACCGCATCGACCACCTGGCCGCCGAACTGCTGCGCCTGGAGGCGGGCCTGGATGCCATTC GCCAGGACGATCCGCTGGTGCCCGAACAAGTGGACAGCAAGACCGTCGCCGCCGTGATTGCCGGCTGGACCGGCATTCCG GTCGGCAAGATGCTCGCCGACGAAGCCCACGCCGTGCGCACCCTCGGCCAGCGCATGGGCCAGCGGGTCATGGGCCAGAG CACCGCGCTGAACACCATCGCCCAACGCCTGCAAGCCTACCGCGCCGGCCTCACCGACCCACAGAAACCGGTTGGCGTGT TCCTGCTGGTGGGCCCCACCGGCGTGGGAAAGACCGAAACCGCCTACGCCCTGGCCGACGCCTTGTACGGCGGTGAGCGC AACCTGATCAGCATCAACCTCTCGGAGTACCAGGAAGCCCACACCGTCAGCCAACTCAAAGGCGCCCCACCCGGCTACGT CGGCTACGGCAGCGGCGGTGTGCTCACCGAAGCGGTACGGCGCAAACCCTATTCGGTGGTGCTGCTGGATGAAATCGAAA AGGCCCACCCGGATGTGCTTGAAGCCTTCTACAACGTCTTCGACAAAGGCCTGATGGAAGACGGCACCGGCCTGGTGGTG GACTTCAAGAACACCGTGATGCTCGCCACCAGCAACGTCGGTGCCGAACTGTTGCTGGACACGCCGACCGCGCAACTGGG CAGCGACGCCTTCAACGAAGCCTTGCACAAGGTGCTGCTGCAAGCGTTCCGTCCGGCATTTTTGGCACGCATGACCGTGG TGGCGTACCGGCCGCTGGATGAAGCGACGCTGGAGGGGATTGTGCTGGCGAAGCTGGAAAAATTGCGCGGGCGCTACAAG GCCGCGACCGGCAAGCAGTTCGAGTTCGATGCGGGGATCGTCAAGGCTGTGTTGGCCAAGTGCAGCGCGGCGGGAGCACG GGACGTCGAGAATGTGCTGATGACCCAAGTGACGGGGAAGTTGGCGGAGTGGGTGTTGGAATGA Protein sequence : MELASLIGRLNPDNRRALERAAQRCMQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLERDAVATETNKALDLFKSGST RTPALSAQTIGLLEDAVVQASVLGLDSIRSGLLLLALLDRDERRSLLLNSASSLLRIPRDALRAHLLEWTESSREHVGGV RPTKPGEPPQKQDPVLDQYTQDLTADARAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAA GDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFIDEAHTLIGAGGAEGGSDAANLLKPALAR GELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDELTAVEMLRGVASKLEQHHGVQVLDAAIHEAVKLSHRYISGRQ LPDKAISVLDTACARVALGQHDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLEGESTSNVQAIRELETRWG EEREAVRELLDTRRELLALSERADSEKADTEIDNRIDHLAAELLRLEAGLDAIRQDDPLVPEQVDSKTVAAVIAGWTGIP VGKMLADEAHAVRTLGQRMGQRVMGQSTALNTIAQRLQAYRAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGER NLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVV DFKNTVMLATSNVGAELLLDTPTAQLGSDAFNEALHKVLLQAFRPAFLARMTVVAYRPLDEATLEGIVLAKLEKLRGRYK AATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGKLAEWVLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-131 | 46 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-131 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005207815.1 | chaperone ClpB | VFG2076 | Protein | 8e-161 | 56 |
| clpB | YP_005207815.1 | chaperone ClpB | VFG2084 | Protein | 7e-132 | 48 |
