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Name : PSF113_2402 (PSF113_2402) Accession : YP_005207806.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : YD repeat / insecticidal toxin protein Function : - COG functional category : - COG ID : - EC number : - Position : 2796012 - 2798747 bp Length : 2736 bp Strand : - Note : - DNA sequence : ATGTCAGCTCTTGTGCAAGGGTTTCACACCCACACTCCGACGCTGACGGTCATTGACCCCCGCAGCCTGACGTCGCGTTC AGTCGCTTATTGCCGTTGCGTGGGAACAGCAGACGCTGAAGAGCGCATCAACCGCACCGCCTATGACGCAATGGGGCGCC TGATTGAGCAATGGGATCCCAGGCTTTGGGCGCTCAGCGCACTAGATGCGCCCGCCAACCTGCTCAATCGTTATTCGCTG TCAGGTAAGGTGCTGGCTTCGATCAGTGTCGATGCCGGTGAGCGGATCAGCTTGTTTGGTGATGGAGATCAATTGGTTCA AACCTGGGACAGCCGCGCCACTGAACGACGGATCGAATACGACGATCTGCTACGCCCGCTGGCCATTTTCGAGCAGGGCG AAGGCAAAATCGCGCGTTGCTCCGAACGCTATGAGTACGCTGGTGCGGAGACCGAATTTACCGGACACAACCAATGCGGG CAGTTGATCCGGCACGACGATCCAGTGGGCACCCAGACATTGGACGAATATGCCCTGACCGGTGGAGTGCTGGAACAGGC CCAGCGCTTTTTGCGTTCGCTGGAAATACCGGATTGGCCGCCGGGGCTGTCGGAGCGCGATGCGTTGCTGGAACCGGTGG AACAAGCTGCAACCAGCGTGACGCACTTCAACCCGCTGGGCGATGTGCTGGAACAGACCGATGCCAAGGGCAATCGACAA TCGTTCGACCACACCGTTGACGGCCAATTGTTCGCCACCCATCTGCAACTCAGCGCTCAAGCCACCGCGCAAACCCTGGT CAGCGCCCTCGCCTACAACGCCTACGGCCAGGTTGAGCAGGAAATCGCTGGCAATGGGGTGATCAGCACGCTGACCTATC GTCCTGAAGACGGTCGCTTGCTGCAGCTTGAGGCTCGACGCGGAACTCAAGCGCTGCAAGACCTGCGTTACGCCTACGAT CCAGTCGGTAATGTGCTGAGCATTGAAGACGCGGCCCTACCGATTCGCTATTTCGCCAACCAGCGGGTTGAACCTATCAA CCGCTATGACTACGACAGCCTCTATCAGTTGATCAAGGCAACCGGCTGGGAGGCTGGCAGCGCCAACCGAGGGCCGGCAT TCAATCGCTTCGACGATCCGGGCGCAGTCGCCAACTATCAGCAAACCTACCACTATGACGCTGCCGGCAACTTGCTTGAA CTGGTCCATGTCGGCCCACAAAATCACAGCCGCAAGCTGACAGCCGCTCGTTACAGCAACCGCTGTTTGCCCGAACAGAA CGACCGTCCCCCGACCGAAGAGGAAATCGCTGCCGCATTTGACGGCAATGGCAACTTGCTGGAGTTGCAACCGAGACAAA CAATGGCTTGGGATCTGCGCAATCAATTGCGTGAGGTGCGACCAGTTGAGCGTGACGGTATCGACGATGATCGCGAGCTA TACCTTTACGGCAGCGACGGGATGCGGCGGCGCAAAATACGCTCTACCCAAACCAACGCCCGTTCGCTGGTCTCGGAAGT CCGTTATTTGCCGGGCCTGGAAACCCGTACTCACGCAGGCACTGGCGAAGTATTACAAGTGATCTGCGGGCAGGCCGGCC GTAGCGCGATGCAGGTGCTGCACTGGGAGACGACACCGCCTGCCGGTATGACCAACGATCAGTATCGCTACAACCTGACC GACCATCTGGGCTCCAGCAGCCTGGAACTGGATGGCGATGCACAAGTGATCAGCCAGGAAACCTATCACCCTTATGGCGG TACGGCTTGGTTTGCCGGACGCAGCGACGTCGAGGCCAGTTACAAAACAGTGCGTTATTCCGGGAAAGAGCGGGATGCGA CAGGGCTTTATTACTATGGGTTCAGGTATTACGCGCCGTGGTTGCAGCGGTGGATTAATCCGGATCCGGCTGGGGATGTG GATGGACTGAATGTTTATGCGATGACTCGTGGAAATCCGATCACGCTTAAAGATAACGACGGCAAGCAAAGCACTTTCCA AGAACTATTTCAACCCTCTCGTGGCGATCTGATATTTGGGCTAAGTTCATCTATCGAGCAACACATGAGTTGGTGGGGGG CGTTGAGAAAACGTGGAGACTATACATCGCAATATCTCTCAGGCGATGATATTGGTCGACTCGCAGATGATCTTAACGCT ACGCGTGAAAAGTACAACAACATCAAGGATAGACCACGTTATTGGGCATCCCCCCCCATTTCCGCTAACAATGAGCAAAA TCAATTTTGGGGTGCGCAGTACAAAGAGCTAGAGAGGTTTGTGTCTTTGTCTGAAAAAATCTATTACTCAGACATACAGT CACGCTATGGCGGCTGGCTCTCTACACTTGCCAATAGAAACTTTGCTGCAAGTTATGCTTCGGAAATGGCGGACAGTCAT TACTCGATAAAAAAAACGTTTGAGAAATTTATAGGGATTGACGATGCGGAATTTGAAAAAAAACTAGTCAGTCGGGCGAG CAAGGCTGGACTATTAACAGCATTGAATTTGGGTAAAAGCAATGTCGTTCATTTCTTGCTGGATGATTTGGACCTAGAGC AGGTGATACTGAAAACTCGACCGTCGGCCACATCGTCAGAGCTACGTTATATTTTTCGTAACCAGGAAAAATTTTCTGGA AAAATAGAATTCTACAAAGATAAGCAACGCGTTGATGCTCCATGGATAACAGACCCGATAGCGTGGAAACGCTATGTACC CAAGGTAGGAAAATGA Protein sequence : MSALVQGFHTHTPTLTVIDPRSLTSRSVAYCRCVGTADAEERINRTAYDAMGRLIEQWDPRLWALSALDAPANLLNRYSL SGKVLASISVDAGERISLFGDGDQLVQTWDSRATERRIEYDDLLRPLAIFEQGEGKIARCSERYEYAGAETEFTGHNQCG QLIRHDDPVGTQTLDEYALTGGVLEQAQRFLRSLEIPDWPPGLSERDALLEPVEQAATSVTHFNPLGDVLEQTDAKGNRQ SFDHTVDGQLFATHLQLSAQATAQTLVSALAYNAYGQVEQEIAGNGVISTLTYRPEDGRLLQLEARRGTQALQDLRYAYD PVGNVLSIEDAALPIRYFANQRVEPINRYDYDSLYQLIKATGWEAGSANRGPAFNRFDDPGAVANYQQTYHYDAAGNLLE LVHVGPQNHSRKLTAARYSNRCLPEQNDRPPTEEEIAAAFDGNGNLLELQPRQTMAWDLRNQLREVRPVERDGIDDDREL YLYGSDGMRRRKIRSTQTNARSLVSEVRYLPGLETRTHAGTGEVLQVICGQAGRSAMQVLHWETTPPAGMTNDQYRYNLT DHLGSSSLELDGDAQVISQETYHPYGGTAWFAGRSDVEASYKTVRYSGKERDATGLYYYGFRYYAPWLQRWINPDPAGDV DGLNVYAMTRGNPITLKDNDGKQSTFQELFQPSRGDLIFGLSSSIEQHMSWWGALRKRGDYTSQYLSGDDIGRLADDLNA TREKYNNIKDRPRYWASPPISANNEQNQFWGAQYKELERFVSLSEKIYYSDIQSRYGGWLSTLANRNFAASYASEMADSH YSIKKTFEKFIGIDDAEFEKKLVSRASKAGLLTALNLGKSNVVHFLLDDLDLEQVILKTRPSATSSELRYIFRNQEKFSG KIEFYKDKQRVDAPWITDPIAWKRYVPKVGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 4e-100 | 42 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 4e-95 | 41 |
