Gene Information

Name : tnpB1 (PSF113_0023)
Accession : YP_005205453.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein TnpB1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25220 - 25555 bp
Length : 336 bp
Strand : +
Note : Putative transposase, tnpB

DNA sequence :
ATGATCCGCATCGACGCCATCTGGCTCGCCACTGAGCCCATGGACATGCGCGCCGGTACCGAGACCGCGCTAGCCAGAGT
GATCGCGGTCTTCGGTGCGGCGAAGCCGCACTGCGCTTATTTGTTTGCCAATCGCCGGGCCAATCGCATGAAAGTGCTGG
TACACGATGGGATTGGTATTTGGTTGGCCGCACGTCGCTTGAACCAGGGCAAGTTTCACTGGCCAAGCCTTCGACAAAGC
AGCGAAATGCAGTTGGATACCGAACAACTTCAGGCCTTAGTGCTCGGACTACCTTGGCAACGTGTTGGAGCCGGCGGTGC
AATCACGCTGCTTTAA

Protein sequence :
MIRIDAIWLATEPMDMRAGTETALARVIAVFGAAKPHCAYLFANRRANRMKVLVHDGIGIWLAARRLNQGKFHWPSLRQS
SEMQLDTEQLQALVLGLPWQRVGAGGAITLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB18 ABD94704.1 ISPpu14 transposase Orf2 Not tested ExoU island B Protein 2e-45 89
unnamed ABR13518.1 transposase Not tested PAGI-7 Protein 9e-45 89
RL060 AAP84185.1 transposase Not tested PAPI-1 Protein 3e-45 89
tnpB AEZ06052.1 transposition helper protein Not tested Tn6167 Protein 3e-35 64