|
Name : serS (PSF113_2181) Accession : YP_005207587.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : SerS protein Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 2556068 - 2557348 bp Length : 1281 bp Strand : + Note : Seryl-tRNA synthetase DNA sequence : ATGCTCGATTCCAAACTGTTACGTAGCAACCTCCAGGACGTAGCGGACCGCCTGGCTTCCCGTGGCTTTGCCCTGGACGT CGCGCGCATCGAAGCGCTGGAAGAACAGCGCAAGACCGTCCAGACCCGCACCGAAGCCCTGCAGGCTGAACGTAACGCGC GCTCCAAGTCCATCGGCCAGGCCAAGCAGCGTGGTGAAGACATCGCGCCGTTGATGGCCGATGTCGAGCGCATGGCGGGC GAATTGAGTGCTGGCAAGGTCGAGCTGGACGCGATCCAGACCGAACTGGATTCGATCCTGCTGGGCATCCCGAACCTGCC TCACGAATCGGTACCGGTCGGTGAGGACGAAGAAGGCAACGTCGAAGTGCGCCGTTGGGGCACGCCGAAAGCCTTCGATT TCCCGGTGCAGGACCACGTGGCCCTGGGCGAGAAGTTCGGCTGGCTCGACTTCGAAACCGCCGCCAAGCTGTCGGGCGCC CGTTTTGCCTTGCTGCGCGGGCCGATTGCCCGTCTGCACCGGGCCTTGGCGCAGTTCATGATCAACCTGCACGTCACTGA GCACGGCTACGAAGAAGCCTACACGCCGTACCTGGTCCAGGCCCCGGCGCTGCAAGGTACCGGCCAGTTGCCGAAGTTCG AGGAAGACCTGTTCAAGATCAGCCGCGAAGGCGAAGCCGACCTGTACCTGATCCCGACCGCCGAAGTGTCGCTGACCAAC ATCGTGGCCGGCGAAATCGTCGACGCCAAGCAACTGCCGATCAAGTTCGTCGCCCACACGCCGTGCTTCCGCAGTGAAGC CGGGGCGTCGGGTCGTGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTCCAGATTGTCGAGC CGTCGAAATCCATGGAAGCGCTGGAAAGCCTGACCGCCAACGCCGAGAAGGTCCTGCAACTGCTTGAACTGCCGTATCGC ACCCTGGCGCTGTGCACCGGCGACATGGGCTTCAGCGCGGTCAAGACCTATGACCTGGAAGTCTGGATCCCGAGCCAGGA CAAGTACCGCGAGATTTCCTCGTGCTCCAACTGTGGCGATTTCCAGGCCCGCCGCATGCAGGCGCGTTTCCGCAACCCGG AAACCGGCAAGCCGGAACTGGTCCACACTCTCAATGGCTCCGGCCTGGCGGTGGGTCGTACCCTGGTGGCCGTGCTGGAA AACTACCAGCAGGCCGACGGTTCGATCCGTGTGCCTGAAGTGTTGAAGCCCTACATGGGCGGCATCGAGGTCATCGGCTA A Protein sequence : MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQAKQRGEDIAPLMADVERMAG ELSAGKVELDAIQTELDSILLGIPNLPHESVPVGEDEEGNVEVRRWGTPKAFDFPVQDHVALGEKFGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSLTN IVAGEIVDAKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSMEALESLTANAEKVLQLLELPYR TLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGIEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-107 | 54 |
