Gene Information

Name : PSF113_2008 (PSF113_2008)
Accession : YP_005207415.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.15
Position : 2355835 - 2356749 bp
Length : 915 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGCAAAAGTAGTGGTAATAGGCAGCCTGAACATGGACCTGGTAACCCGGGCGCCGCGTCTGCCGCGTGGTGGTGA
AACACTGATCGGCAAGTCGTTCTCCACCATTCCGGGCGGCAAGGGGGCCAACCAGGCGGTGGCCGCCGCGCGCCTGGGTG
CGCAGGTGTCGATGGTCGGTTGCGTGGGCAATGATGCCTACGGCGAACAGTTGCGTGGCGGGCTGTTGGCCGAGGGCATC
GACTGCCAGGCGGTCAGCGTGGTGGAGGGGGCCAGCGGCGTGGCGCTGATCGTCGTCGACGACAATAGCCAGAATGCGAT
CGTTATCGTTGCCGGTGCCAACGGTGCGCTCACCGCCGAGGTCCTGGACAGTGTCGATGACGTGCTGCAAAGCGCCGATG
TCATCATCTGTCAGCTCGAAGTGCCGGATGCCACCGTCGGCCACGCCCTCAAGCGCGCTCGTGAGTTGGGCAAGATCGTC
ATCCTCAACCCGGCGCCAGCCTCCCGGACATTGCCGGCCGACTGGTACGCCTGCATCGACTACCTGATTCCCAATGAAAG
CGAAGCAGCGGTGCTGAGCGGGCTGGCGGTGGATTCCCTGGAAACCGCCGAAGCCGCCGCGGCGCATCTGATCGCCGCTG
GCGCCGGCAAGGTGATCGTGACCCTGGGTGCCCAGGGGTTGATGTTCGCCAACGGTGCCAGCTTCGAACACTTCCCGGCC
CTGCGGGTCAAGGCCGTGGACACCACGGCGGCCGGAGACACCTTTGTCGGCGGCTTCGCGGCAGCCCTGGCGGGCGGCAA
AAACGAGGTCGACGCGATTCGTTTCGGCCAGGCCGCCGCCGCGCTGTCGGTCACCCGCGCGGGCGCGCAGCCTTCAATCC
CCACGTTGCTGGAAGTACAGGCTTTCAAATCATGA

Protein sequence :
MPAKVVVIGSLNMDLVTRAPRLPRGGETLIGKSFSTIPGGKGANQAVAAARLGAQVSMVGCVGNDAYGEQLRGGLLAEGI
DCQAVSVVEGASGVALIVVDDNSQNAIVIVAGANGALTAEVLDSVDDVLQSADVIICQLEVPDATVGHALKRARELGKIV
ILNPAPASRTLPADWYACIDYLIPNESEAAVLSGLAVDSLETAEAAAAHLIAAGAGKVIVTLGAQGLMFANGASFEHFPA
LRVKAVDTTAAGDTFVGGFAAALAGGKNEVDAIRFGQAAAALSVTRAGAQPSIPTLLEVQAFKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 1e-26 42
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 1e-26 42