Gene Information

Name : glcE (PSF113_1979)
Accession : YP_005207386.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein GlcE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2321866 - 2322924 bp
Length : 1059 bp
Strand : -
Note : Glycolate dehydrogenase, FAD-binding subunit GlcE

DNA sequence :
ATGAGCCGCGAAGCCGACCAGGACGCCAGCGACCTGCTGCTCGAACAGGTCAATCGCGCCCGGGCCAACGCCACGCCGCT
GCGTATCCAGGGTTCGAACAGCAAGGCCTTCCTGGGGCGCGAAGTGGCCGGCGAAGTGCTGGACACCCGGGTGCATCGTG
GCATCGTCCACTACGACCCCACCGAACTGGTCATCACGGCCCGTGCCGGCACCCCGCTGCGGGAACTGCTTGCCGCCCTC
GACGCCGCCGGGCAGCGGCTGCCCTGCGAACCGCCAACGTTTGGCGACGACGCCACGGTCGGCGGCATGGTCGCCGCCGG
GCTGTCGGGGCCGCGTCGCCCATGGGCCGGTTCGGTGCGCGACTTTGTCCTGGGCACGCGCCTGATCAGTGGCCACGGCA
CGTTGCTGCGTTTCGGCGGCGAGGTGATGAAAAACGTCGCCGGCTACGACCTCTCGCGCCTGTTGGCCGGCAGTTTCGGT
TGCCTGGGGGTGATCACCGAAGTCTCCTTGAAGGTGCTGCCCAAGCCCCGTCACAGCCTGAGCATCCGCCTGGAACTGGA
CAGCACCGAGGCCCTGGAAAAACTCGCCGAATGGGGCCGTCAGCCCCTGCCCATCAGCGCCGCCAGCCATGACGGCGACG
GCCTGCACCTGCGCCTGGAGGGGGGCGAAGGCTCGGTCAGCGCCGCTCATCAGCGTTTCGGTGGCGAGGTGATCGACGAT
CAATACTGGACGGCACTCAATGAGCATCGGCTACCCTTCTTCGATGAAGGCTTGCCACTGTGGCGCCTGTCGTTACCCAA
CCACACCGGCCCGCTCACCCTGCCCGGCGCGCAGTTGATCGACTGGGCCGGCGCCCAACGCTGGTTGAAAACCGAGGCCG
ACACGGTGCAAACCCTGGCCCATGAAGTCGGCGGCCATGCCACCTGCTATCGTCAGGGGGCCAGCGACACACCGTTCCAG
CCACTGGCCCCGGCGCTGCTGCGCTATCACCGGCAACTCAAGGCCCAGCTCGATCCCTTGGGGTTGTTCAATCCCGGCCG
CATGTATCTGGAGTTCTAG

Protein sequence :
MSREADQDASDLLLEQVNRARANATPLRIQGSNSKAFLGREVAGEVLDTRVHRGIVHYDPTELVITARAGTPLRELLAAL
DAAGQRLPCEPPTFGDDATVGGMVAAGLSGPRRPWAGSVRDFVLGTRLISGHGTLLRFGGEVMKNVAGYDLSRLLAGSFG
CLGVITEVSLKVLPKPRHSLSIRLELDSTEALEKLAEWGRQPLPISAASHDGDGLHLRLEGGEGSVSAAHQRFGGEVIDD
QYWTALNEHRLPFFDEGLPLWRLSLPNHTGPLTLPGAQLIDWAGAQRWLKTEADTVQTLAHEVGGHATCYRQGASDTPFQ
PLAPALLRYHRQLKAQLDPLGLFNPGRMYLEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 5e-102 64