Gene Information

Name : PSF113_1918 (PSF113_1918)
Accession : YP_005207328.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Resistance
Product : O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.48
Position : 2249955 - 2251166 bp
Length : 1212 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAGGATTGGGATGCCGGTCGGCTGGACAGCGACCTTGAAGGCGTAGCGTTCGATACCCTGGCGGTTCGCGCGGG
TCAGCACCGTACACCGGAAGCCGAACATGGCGAGCCGATGTTTTTCACCTCCAGCTACGTGTTCCGCACCGCTGCCGATG
CAGCCGCACGGTTTGCCGGCGAGGTGCCGGGCAACGTTTACTCGCGCTACACCAACCCGACCGTGCGGGCTTTCGAGGAG
CGCATCGCCGCCCTGGAAGGCGCCGAGCAAGCCGTGGCCACTGCCACCGGCATGGCCGCGATCATGGCCGTGGTGATGAG
CCTGTGCAGCGCTGGCGACCACGTGCTGGTGTCGCGCAGCGTCTTCGGCTCGACCATCAGCCTGTTCGAAAAGTACTTCA
AGCGCTTTGGCGTGGAAGTCGATTACGTGCCCCTGGCGGACCTGTCCGCTTGGGATGCGGCAATCAAGGCCAATACCAAG
CTGCTGTTCGTCGAATCGCCTTCCAACCCCCTGGCCGAACTGGTGGACATCGCCGCGCTGGCGGAAATCGCCCACGCCAA
GGGCGCCATGCTGGTGGTCGATAACTGCTTCTGTACCCCGGCGCTGCAACAACCGCTGAAGCTGGGTGCGGACGTGGTGG
TGCATTCGGCGACCAAGTTCATCGACGGCCAGGGCCGTTGCATGGGGGGCGTGGTGGCCGGTCGTAGCGAGCAGATGAAG
GAAGTGGTGGGCTTTTTGCGCACCGCAGGCCCCACCCTCAGCCCGTTCAACGCCTGGGTCTTCCTCAAGGGCCTGGAAAC
CCTCGGCCTGCGCATGAAAGCCCATTGCGCCAATGCCCAGGCCTTGGCCGAGTGGCTGGAGCAGCAGGACGGCATCGAGA
AGGTGCATTACGCCGGCCTCAAGAGCCATCCGCAACATGATCTGGCCTTGCGTCAGCAACGCGGTTTCGGCGCGGTGGTG
AGCTTTGAGGTCAAGGGCGGCAAGGAGGGTGCCTGGCGCTTCATCGACGCGACCCGGTTGATTTCCATCACCGCCAACCT
GGGTGACAGCAAGACCACCATCACCCACCCGAGCACCACGTCCCACGGTCGCCTGTCGCCCCAGGAACGTGAATCGGCGG
GTATTCGTGACAGCCTGATCCGCGTTGCGGTCGGTCTGGAAGACGTGGCCGACCTGCAAGCCGATCTGGCCCGCGGGTTG
GCGGCCTTGTGA

Protein sequence :
MSQDWDAGRLDSDLEGVAFDTLAVRAGQHRTPEAEHGEPMFFTSSYVFRTAADAAARFAGEVPGNVYSRYTNPTVRAFEE
RIAALEGAEQAVATATGMAAIMAVVMSLCSAGDHVLVSRSVFGSTISLFEKYFKRFGVEVDYVPLADLSAWDAAIKANTK
LLFVESPSNPLAELVDIAALAEIAHAKGAMLVVDNCFCTPALQQPLKLGADVVVHSATKFIDGQGRCMGGVVAGRSEQMK
EVVGFLRTAGPTLSPFNAWVFLKGLETLGLRMKAHCANAQALAEWLEQQDGIEKVHYAGLKSHPQHDLALRQQRGFGAVV
SFEVKGGKEGAWRFIDATRLISITANLGDSKTTITHPSTTSHGRLSPQERESAGIRDSLIRVAVGLEDVADLQADLARGL
AAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-55 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_1918 YP_005207328.1 O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase BAC0207 Protein 6e-66 43