Gene Information

Name : PSF113_1830 (PSF113_1830)
Accession : YP_005207245.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2120657 - 2121907 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence :
ATGCCGACAAAAAAGAAACCCGCGCTACGAGAACTACCGAAAATCCCGAAAGAGTTGCTCGAACAGTTCTCCGGCGGAAT
GATGACCGCTGAAGCCATCGAGGACGCTTCAGCGGCGTTCAAGAAGGCGTTGATCGAGCGAGCCCTGAGTGCCGAACTGG
GCCATCACCTGGGCTATCCGCCGGGCGCGCAGCGCCCAGAGGATGAAACCAACCAGCGTAATGGCAAAAGCGGCAAGACG
GTTCTGACCGGTGATGGCCCCATCCGGCTAGATATCCCTCGCGACCGGGACGGCAGTTTTTCGCCCATTCTGATTCCCAA
ACACGAGCGTCGTTACACCGGTTTTGACGACAAGATCATCTCCATGTATGCCCGTGGAATGACTGTCAGAGAGATCCGTG
CATTTCTCTCCGAGCAATACGGTACAGACGTTTCGCCTGATTTCATCAGTTCCGTAACTGACGAGGTCATGGCAGAGATC
GGCGCCTGGCAACAGCGGCCCTTGGAGCCGATGTATCCGGTTATTTTCTTCGATGCCCTGCGGGTCAAAATCCGCGAAGA
GGGTCTGGTTCGCAACAAAGCGATCTACTTGGCCTTGGGTGTTTTGCCTGACGGGACGCGCGATATCCTCGGCATCTGGA
TCGAAAACACCGAGGGCGCCAAATTCTGGATGAAGGTTTTCAACGACCTCAAGACGCGCGGTGTCGAGGACGTACTGATT
GCCGTGACCGATGGTCTCAAAGGTATGCCAGAAGCCCTCACCGCCGTGTTTCCAGACACGACACTGCAAACATGCATCGT
TCATCTGATCCGCAACAGCCTTGATTACGCGGCCTGGGATAAGCGTCGCGAACTGGCCAAGGCGCTCAAACCGATCTACC
AGGCAATCACCGCCGAAGCGGCTGAACAGGCGCTGGATGCGTTTGAAAGCGGGCCATGGGGTAAGCAATACCCAACGGTA
GTGGCGGCCTGGCGGCGCGCTTGGGATCGAGTGATTCCATTTTTCGTTTTCCCGCCGGCGATCCGAAAAGTGATCTACAC
GACCAACGCAATCGAGAGCATCAACGCTCAGCTACGAAAGATCATCAAGACCCGCGGCCACTTCCCGACCGATGATGCGG
CAACGAAACTGATCTGGCTTGGGTTGCGCAATATCACAGCAAACTGGGGCTCAGCGGCCCACGACTGGAAGAGTGCGATG
AATCAATTCGCGATTCTGTATGGAGATCGATTTATCAGGCCAACCTGGTAA

Protein sequence :
MPTKKKPALRELPKIPKELLEQFSGGMMTAEAIEDASAAFKKALIERALSAELGHHLGYPPGAQRPEDETNQRNGKSGKT
VLTGDGPIRLDIPRDRDGSFSPILIPKHERRYTGFDDKIISMYARGMTVREIRAFLSEQYGTDVSPDFISSVTDEVMAEI
GAWQQRPLEPMYPVIFFDALRVKIREEGLVRNKAIYLALGVLPDGTRDILGIWIENTEGAKFWMKVFNDLKTRGVEDVLI
AVTDGLKGMPEALTAVFPDTTLQTCIVHLIRNSLDYAAWDKRRELAKALKPIYQAITAEAAEQALDAFESGPWGKQYPTV
VAAWRRAWDRVIPFFVFPPAIRKVIYTTNAIESINAQLRKIIKTRGHFPTDDAATKLIWLGLRNITANWGSAAHDWKSAM
NQFAILYGDRFIRPTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 1e-86 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-96 45
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 2e-88 44
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 4e-82 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 4e-84 43