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Name : prgK (PSF113_1799) Accession : YP_005207219.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein PrgK Function : - COG functional category : - COG ID : - EC number : - Position : 2094346 - 2095065 bp Length : 720 bp Strand : + Note : Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) DNA sequence : ATGAAGCCGGGCCTGCTGTTGCTGCTGTTGTGCCTCGCGCTGGTGGGGTGCCGCCAGCCGAACCTGCTGGAAGGGCTGGA TCAGCAGCAGGCCAATGAAGTGCTGTCGGTGCTGCAACGCAACAACATCGCGGCGGTGAAAGTCGACACGGGTAAAACCG GCTATGCGGTGAAAATCGACGCCCGTGATTTTTCCGCCGCCGTCGATCTGCTCAATCTCTATTCGTTACCTTCCCGGCCA CGCCTGCAAGTGGCCGAGATGTTTCCGTCCGATTCCCTGGTGGCCTCGCCCCGTGCGGAAAAGGCCCGCTTGTATTCAGC GCTGGAGCAGCGCATTGAACAGTCGCTGGCGGTACTCGAAGGCGTGGTGTCGGCACGGGTCCATGTCAGTTACGACCTGG ATGCCGGCGAGGGCGGGCGCAAGCCGCCGCCGGTCCACCTGTCGGCGGTGGTGCTGCATGAGCGCGATGTCGAAGCGCAA TTGCTGATCACCGACATCAAGCGTTTCCTCAAGAACAGTTTTGCGGCGGTGGAGTACGAGAACGTCTCGGTGGTGCTGTC CAAGCGCTCGCCGATCCAGCATGTGGCGCCGTCGGCAGTCGCCGCACCGGGGCCTTCACCGTGGCCGTGGTGGGCGGCGA TCAGCGCGCTGCTGCTGGCCGGCGGCGGCGCTTGGGCCTTCCGCCAGTCGAGCGCGGGGCGGCGTGATGTCGGACCTTGA Protein sequence : MKPGLLLLLLCLALVGCRQPNLLEGLDQQQANEVLSVLQRNNIAAVKVDTGKTGYAVKIDARDFSAAVDLLNLYSLPSRP RLQVAEMFPSDSLVASPRAEKARLYSALEQRIEQSLAVLEGVVSARVHVSYDLDAGEGGRKPPPVHLSAVVLHERDVEAQ LLITDIKRFLKNSFAAVEYENVSVVLSKRSPIQHVAPSAVAAPGPSPWPWWAAISALLLAGGGAWAFRQSSAGRRDVGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 1e-56 | 68 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-53 | 63 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 1e-53 | 63 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 9e-54 | 63 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 9e-54 | 63 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 1e-54 | 59 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 6e-53 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| prgK | YP_005207219.1 | protein PrgK | VFG0533 | Protein | 4e-54 | 63 |
| prgK | YP_005207219.1 | protein PrgK | VFG0998 | Protein | 6e-45 | 52 |
| prgK | YP_005207219.1 | protein PrgK | VFG1787 | Protein | 6e-37 | 47 |
