Gene Information

Name : iagB (PSF113_1795)
Accession : YP_005207215.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein IagB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2091975 - 2092409 bp
Length : 435 bp
Strand : +
Note : Invasion protein IagB precursor

DNA sequence :
GTGCCGGTGTGTCTTGGCCTGGGGTTTGGCATGGCCCAGGCGCACGCCTGGTGCTGGAGCAAGGCGGGGCAATTGCATGC
CATCGAGCCCGAGCTGCTGCAAGCGATTGCCGATGTCGAATCCGGGCTGAAGCCAGATGCAATCAACCACAACCGTAACG
GCACCCGCGATATCGGGCTGATGCAGATCAACAGCATTCATCTGTCGCGCCTCAGTACCGAGGGCATCACCGAACAGCGC
CTGCTGGAGGACCCTTGCCTGTCGGTGGAAGTCGGGGCATCGGTGCTGGCCGGGTTTATCGCCCGCTATGGCTACAACTG
GACGGCGGTCGGCGCCTACAACGCCGGCAATTCCCCCCATCGTCAAGCCGCGCGGCTGCGCTATGCGCGCAAAGTCTGGC
AGCGCTACCAGGTGTTGACCCAGGCCCGGGAATGA

Protein sequence :
MPVCLGLGFGMAQAHAWCWSKAGQLHAIEPELLQAIADVESGLKPDAINHNRNGTRDIGLMQINSIHLSRLSTEGITEQR
LLEDPCLSVEVGASVLAGFIARYGYNWTAVGAYNAGNSPHRQAARLRYARKVWQRYQVLTQARE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 9e-33 55
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 9e-33 55
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 8e-33 54
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 8e-33 54
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 2e-13 47
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 2e-13 47
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 1e-12 45
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 3e-18 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 3e-15 42
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 2e-15 42
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 2e-15 42
unnamed AAC31524.1 L0045 Not tested LEE Protein 1e-15 42
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 1e-15 42
unnamed AAL06358.1 unknown Not tested LEE Protein 9e-15 42
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-15 41
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-15 41
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 5e-15 41
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 5e-15 41
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-15 41
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-15 41
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iagB YP_005207215.1 protein IagB VFG0539 Protein 2e-33 55
iagB YP_005207215.1 protein IagB VFG0994 Protein 5e-26 46
iagB YP_005207215.1 protein IagB VFG0719 Protein 1e-15 42
iagB YP_005207215.1 protein IagB VFG0823 Protein 5e-16 42
iagB YP_005207215.1 protein IagB VFG1789 Protein 9e-15 41