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Name : spaS (PSF113_1788) Accession : YP_005207208.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein SpaS Function : - COG functional category : - COG ID : - EC number : - Position : 2084414 - 2085448 bp Length : 1035 bp Strand : + Note : Surface presentation of antigens protein SpaS DNA sequence : ATGTCATCCAGCGCCTCGAAGACTGAAAAGCCCACCGCCAAGCGCCTCAGGGATGCGGCGCGCAAAGGGCAGACGTTCAA GGCCAAGGACCTGGTCATCACCTGCCTGACCCTATGCGGCATCACCTACATGGTCTTCAACAGCTCACTGAGCGAGATCA TGGAGGTCTACCGGCGCATCATCGCCAGCGATTTCGACGCTGAGCTGCAAGCCTACTCGGCGATGCTGGTGCTGCTTGGC CTCAAGGTGTTGCTGCCGCTGTTGCTGGTGTGTGTGCTGACCAGTGCGTTGCCGACCTTGCTGCAAAGCGGTTTTGCCTT GGCCAGCGAAGCCTTGAAACTGAATCTGGGCGCGTTGAACCCGGTCAATGGCTTCAAGAAACTGTTCAGCCTGCGCACCG TCAAGGACACGTTCAAGGCGCTGTTGTACCTGGGCAGTTTCGCCATGGCGCTATGGATCGTCTGGGTCACCCAGCGGCAA TTGCTGTTCGCCCAACTGTTCGCCCAGGCGCCGGCGTTGTTTGCGATCTGGGGGCATTTGTTGCTGGTGCTGGTGCTGGC GTTCCTGGCCTGCGTCCTGTTGATCGTCGTACTCGATGCCCTCAGCGAATACTGGTTGTTCATGAAAGACCAGATGATGG ACAAGGATTCGGTCAAGCGTGAACACAAGGAGCAGGACGGCAACCCGCAGATCAAGGGTCGTCGCCGCGACTTGCACATG GAGCTGTTGTCGGAGCAGGTCAAATCCGATGTGCGCAGCTCGCGCATGATCATCGCCAACCCCACCCACATTGCCATCGG CGTGTATTTCCGCCCGGAGATCACGTTGCTGCCGTTTATCTCCCTGATGGAAACCAACCAGCGCGCCCTGGCGGTTCGGG CGTACGCCAAGGAAGTGGGTGTGCCGGTGATCAACGACGTCGCCTTGGCCCGCCGCATCTTCAAGACCCACCAGCGCTAC AGCTTCCTCCAGGTGCAGGAAGTCGAGGAGGTGCTGCGGTTGCTGATCTGGCTTGAGCAGGTTGAGCAGGCGTGA Protein sequence : MSSSASKTEKPTAKRLRDAARKGQTFKAKDLVITCLTLCGITYMVFNSSLSEIMEVYRRIIASDFDAELQAYSAMLVLLG LKVLLPLLLVCVLTSALPTLLQSGFALASEALKLNLGALNPVNGFKKLFSLRTVKDTFKALLYLGSFAMALWIVWVTQRQ LLFAQLFAQAPALFAIWGHLLLVLVLAFLACVLLIVVLDALSEYWLFMKDQMMDKDSVKREHKEQDGNPQIKGRRRDLHM ELLSEQVKSDVRSSRMIIANPTHIAIGVYFRPEITLLPFISLMETNQRALAVRAYAKEVGVPVINDVALARRIFKTHQRY SFLQVQEVEEVLRLLIWLEQVEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 6e-80 | 59 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 6e-81 | 59 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 5e-81 | 59 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 5e-81 | 59 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 2e-78 | 56 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 4e-62 | 47 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 6e-53 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaS | YP_005207208.1 | protein SpaS | VFG0548 | Protein | 3e-81 | 59 |
| spaS | YP_005207208.1 | protein SpaS | VFG1015 | Protein | 5e-67 | 50 |
| spaS | YP_005207208.1 | protein SpaS | VFG2452 | Protein | 1e-53 | 46 |
| spaS | YP_005207208.1 | protein SpaS | VFG1770 | Protein | 1e-45 | 43 |
