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Name : spaR (PSF113_1787) Accession : YP_005207207.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein SpaR Function : - COG functional category : - COG ID : - EC number : - Position : 2083636 - 2084439 bp Length : 804 bp Strand : + Note : Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) DNA sequence : ATGTCGGTGGCGTTTTTTTTCGAGTTGTACGCCTGGTTCGCTGCGGCGCTGTTGGGCGTGGCGCGTCTGGCGCCGATTTT CTTCATGTTGCCGTTTCTCAATAGCAGCGTGCTGACCGGCGTCGCGCGCCAGGCGGTGATTGTGCTGGTGGCGCTAGGCT TCTGGCGCTACGTCGGCGTGCCTACGCCAGCCCTCGACAGCGTGGCGTTCCTCGGTCTGGTGCTGCGTGAGGCGGGTATC GGTGTGCTGCTGGGCGTGCTGCTGGGCTGGCCGTTCTGGGTGCTGCATGCCATGGGCAACCTGATCGACAACCAGCGCGG GGCCATGCTCAGCAGCACGGTGGACCCGGCCAACGGTGTCGATACCTCGGAGTTGGCGAATTTTCTCCAGTTGTTTGCCG CAGCGGTTTATCTCGAAGGTGGCGGCCTGTTGTTGATGCTCGAAACCGTCGGCCACAGCTATCGCCTTTGCGCGCCAGCG AGCAGTTGTGAGTTGCACCTGCCCGCGCTCTATTCGTTGCTCGATGCGCTGGTGAGCAAGACCCTGGTCATCAGTGCGCC GGTGGTGGCGACCTTGCTGGTCAGCGAGGCGCTGCTTGGGTTGCTCTCGCGGTATGCGCCGCAGATGAACGCTTTCTCGG TGTCGCTGACGGTCAAGAGCCTGGTGGCGTTGGTGGTATTGATGCTGTATTTCGGCGTGCATCTTCCTGATGAAGTCCTG CGCATGGGCACGCTGTCCGACGGCTTGGCGCAGTATCTGGATGGCGGGGAGGGCGGAGATGTCATCCAGCGCCTCGAAGA CTGA Protein sequence : MSVAFFFELYAWFAAALLGVARLAPIFFMLPFLNSSVLTGVARQAVIVLVALGFWRYVGVPTPALDSVAFLGLVLREAGI GVLLGVLLGWPFWVLHAMGNLIDNQRGAMLSSTVDPANGVDTSELANFLQLFAAAVYLEGGGLLLMLETVGHSYRLCAPA SSCELHLPALYSLLDALVSKTLVISAPVVATLLVSEALLGLLSRYAPQMNAFSVSLTVKSLVALVVLMLYFGVHLPDEVL RMGTLSDGLAQYLDGGEGGDVIQRLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-45 | 56 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-45 | 56 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 2e-46 | 56 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 3e-44 | 55 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 3e-33 | 47 |
| epaR | AAZ31291.1 | EpaR | Virulence | ETT2 | Protein | 2e-19 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaR | YP_005207207.1 | protein SpaR | VFG0549 | Protein | 1e-46 | 56 |
| spaR | YP_005207207.1 | protein SpaR | VFG1014 | Protein | 1e-30 | 49 |
| spaR | YP_005207207.1 | protein SpaR | VFG2453 | Protein | 3e-29 | 45 |
