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Name : gabD (PSF113_0176) Accession : YP_005205602.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Unknown Product : protein GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 190766 - 192208 bp Length : 1443 bp Strand : + Note : Glutarate-semialdehyde dehydrogenase; Succinate-semialdehyde dehydrogenase [NADP+] DNA sequence : ATGCAGCTTAAAGACACCCAGTTGTTCCGCCAGCAAGCCTTCATCGATGGCGCTTGGGTCGATGCGGACAATGGTCAGAC AATCAAGGTCACCAACCCGGCGACGGGCGAAGTGCTGGGCACTGTGCCGAAGATGGGCGCCGCCGAAACCCGTCGTGCGA TTGAGGCCGCCGACAAGGCATTGCCGGCCTGGCGTGCACTGACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTAC GAATTGCTGATCGAAAACCAGGACGATCTCGGTCGCCTGATGACCCTGGAACAAGGCAAGCCGCTGGCCGAAGCCAAGGG CGAAATCGTCTACGCCGCCTCCTTCATTGAGTGGTTCGCCGAAGAAGCCAAGCGCATCTACGGTGACGTGATTCCCGGCC ACCAACCCGACAAGCGCCTGATCGTGATCAAGCAGCCGATCGGCGTGACCGCGGCCATTACCCCGTGGAACTTCCCGGCC GCAATGATCACCCGCAAGGCTGGCCCAGCCCTGGCTGCCGGTTGCACCATGGTCATCAAGCCAGCGTCGCAAACCCCGTT CTCGGCCCTGGCCCTGGTGGAACTGGCGCACCGTGCCGGCATTCCGCAAGGCGTGTTGAGCGTCGTTACCGGCAGCGCTG GCGACATCGGTGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGTCCTTCACCGGCTCGACCGAGATCGGTCGCCAG TTGATGGCCGAATGTGCCAAGGACATCAAGAAAGTCTCCCTGGAACTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCGGATCTGGATAAGGCCGTCGAAGGCGCGATCATTTCCAAATACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GTCTGTACATCCAGGATTCGGTGTACGACGCGTTTGCCGAAAAACTGAAAGTGGCGGTCGCCAAGCTCAAGATCGGCAAC GGCCTGGACGATGGCACCACCACCGGTCCCTTGATCGACGGCAAAGCGGTCGCCAAGGTGCAGGAACACATCGCTGATGC TGTCAGCAAAGGCGCGACCGTGCTGTCGGGCGGCAAGGCGATGGAAGGCAACTTCTTCGAGCCGACCATCCTGACCAACG TGCCGAAGAACGCCGCCGTGGCGAAGGAAGAAACCTTCGGCCCGCTGGCGCCGCTGTTCCGTTTCAAAGACGAAGCCGAA GTGATCGCGATGTCCAACGACACCGAGTTCGGCCTGGCCTCGTACTTCTATGCCCGCGACCTGGGCCGTGTGTTCCGTGT GGCTGAAGCCCTGGAATACGGCATGGTCGGCGTCAACACCGGGTTGATTTCCAACGAAGTCGCGCCATTCGGCGGCATCA AGGCTTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAGGATTACCTGGAAATCAAATACCTCTGCCTGGGTATC TGA Protein sequence : MQLKDTQLFRQQAFIDGAWVDADNGQTIKVTNPATGEVLGTVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWY ELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAHRAGIPQGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKVAVAKLKIGN GLDDGTTTGPLIDGKAVAKVQEHIADAVSKGATVLSGGKAMEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-157 | 67 |
