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Name : invA (PSF113_1781) Accession : YP_005207200.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein InvA Function : - COG functional category : - COG ID : - EC number : - Position : 2077073 - 2079124 bp Length : 2052 bp Strand : + Note : Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) DNA sequence : ATGCTCAACGTGTTCTTGCGCAATGTCGGCGCGCGCCCGGAGCTGCTGATCCTCACCTTGATGGTGATGATCATCGCCAT GCTGATCATCCCCTTGCCGACAGTGCTGGTGGACTTTCTCATCGGCCTGAACATCGTCATCTCGCTGTTGGTGTTCATGG GCTCGTTCTACATCGAACGCATCCTCAGCTATTCGACGTTCCCGGCACTGCTGCTGTTGACGACCTTGTTCCGGCTGGCG CTGTCGATCAGCACCAGCCGGCTGATTCTCAGCCAGGCCGATGCCGGCGAGATCATCGCGTCGTTCGGCGACTTCGTGAT CGGCGAAAGCCTGGTGGTGGGTTTCGTGATTTTTTCCATCGTCACCATTGTCCAGTTCATCGTGATCACCAAAGGCTCGG AACGGGTCGCCGAAGTGGCGGCGCGCTTTTCCCTGGACGGCATGCCCGGCAAGCAGATGAGCATCGACGGCGACCTCAAG GCCGGAGCCATCGATGCGGCCCAGGCGCGGGAAAAACGCAGCGTGCTGGAGCGTGAAAGCCAGTTGTACGGCTCTTTTGA TGGGGCGATGAAATTCATCAAGGGCGATGCCATCGCCGGCATCATCATTATCTTCGTCAACTTCATCGGTGGCATGGCCA TCGGCGTCGGGCAATTGGGCATGGACCTGTCCACGGCCTTGTCCACCTACACGTTGTTGACCATCGGCGATGGCCTGGTC GCGCAGATCCCCGCTCTGCTGATCGCCATCGGCGCCGGTTTCATCGTCACCCGAGTCAACGGTGATGACAGCAACCTGGG GCGCAACATGCTCACCCAGATGCTGGGCAACCCGTTCGTGCTCGGTGTCACCGCGATGCTGGCGGTGGGCGTGGGGCTGT TGCCCGGTTTTCCACTGCTGACCTTTCTCTCGATTGCCAGTGTGCTGGGGCTGGTGGTGTTTGTGCGCCATCGCAAGTCC TTGCGCCAGACGAGCCCGGGTGAAAGCCGCAGCGAAGCCGCCGAGCCAGGCGCGGGGCAGGGCGAGTCGGGGTTGCTCGA TGACGTCGACAACCTGGCGACCGAAACCATCGCCCTGATGCTGCTGGTGCCCACGGTGCGCTTGCAAGCGCTGGAGAAGG AGCGTTGGGCGGCGCGCTTTCGCAGCCAGTTCTTCGTCGATTACGGGCTGCGTATTCCCGAACTGCGGCTACGCGCCAGC GAGGCATTGCCGGCCCATCAAGTGGCGGTGCTGATCAATGAAGTGCGCGCCGAGCAGTTCGATATTCATTTCGATCACTG GCGCCTGCTGGACTATTCGCCGGAGCTGGAGCCGTTGGGCTTTGCCCTGGTGCTCGGTAACGACAGCAATCGCCTCGGTG GTGTCTGGGTCACCGCCGCCGACCGCGAGCGCGTGCAGCAGTTGGGCTATCACCTGCGACCTGCCGACGAAGAGTGCTAT CGCTGCCTGGTCACGCTGCTGGCGTGCAACATCCAGGAGTTTTTCGGCGTGCAGGAAACCAAGCAGTTGCTCGATGAAAT GGAAGCGCGCTACCCCGACCTGCTCAAGGAAGTCTATCGCCATGTCACGGTGCAGAAGATCGCCGAGGTGTTGCAGCGCT TGATCGGTGAGCGCATCTCCGTGCGCAACATGAAGCTGATCCTCGAATCCCTCGCCCATTGGGCCTCCCGGGAAAAGGAT GTGCTGGCGCTGGTCGAGCATGTTCGTGGCGCCATGGCCCGCTACATCAGCAACAAGTTTGCCCAGGGCAACGATCTGCG GGTGCTGCTGTTGTCGGCGGAGTTCGAAGACGTGGTGCGCCGGGGCATCCGGCAAACCTCGGGCGGCAGTTTCCTCAACC TGGAACCGGCCGAGTCGGAAGAGCTGATGGACCGCCTCAGCGTCGGCCTGGACAGCGTGCACATCGCCCACAAGGACATG GTGCTGCTGTGTTCGGTCGATGTGCGGCGCTACATCAAGAAACTGGTCGAGGGACGTTTCCGGGAACTGGACGTGATGTC GTTCGGCGAAGTCTCCGAGACCGTCTCGGTCAATGTCATCAAGACGCTTTGA Protein sequence : MLNVFLRNVGARPELLILTLMVMIIAMLIIPLPTVLVDFLIGLNIVISLLVFMGSFYIERILSYSTFPALLLLTTLFRLA LSISTSRLILSQADAGEIIASFGDFVIGESLVVGFVIFSIVTIVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDGDLK AGAIDAAQAREKRSVLERESQLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGMAIGVGQLGMDLSTALSTYTLLTIGDGLV AQIPALLIAIGAGFIVTRVNGDDSNLGRNMLTQMLGNPFVLGVTAMLAVGVGLLPGFPLLTFLSIASVLGLVVFVRHRKS LRQTSPGESRSEAAEPGAGQGESGLLDDVDNLATETIALMLLVPTVRLQALEKERWAARFRSQFFVDYGLRIPELRLRAS EALPAHQVAVLINEVRAEQFDIHFDHWRLLDYSPELEPLGFALVLGNDSNRLGGVWVTAADRERVQQLGYHLRPADEECY RCLVTLLACNIQEFFGVQETKQLLDEMEARYPDLLKEVYRHVTVQKIAEVLQRLIGERISVRNMKLILESLAHWASREKD VLALVEHVRGAMARYISNKFAQGNDLRVLLLSAEFEDVVRRGIRQTSGGSFLNLEPAESEELMDRLSVGLDSVHIAHKDM VLLCSVDVRRYIKKLVEGRFRELDVMSFGEVSETVSVNVIKTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 65 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 3e-152 | 59 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 4e-162 | 57 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 7e-144 | 52 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 5e-104 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| invA | YP_005207200.1 | protein InvA | VFG0557 | Protein | 0.0 | 65 |
| invA | YP_005207200.1 | protein InvA | VFG1006 | Protein | 2e-168 | 59 |
| invA | YP_005207200.1 | protein InvA | VFG1780 | Protein | 5e-158 | 56 |
| invA | YP_005207200.1 | protein InvA | VFG2461 | Protein | 8e-150 | 55 |
| invA | YP_005207200.1 | protein InvA | VFG0064 | Protein | 2e-98 | 44 |
| invA | YP_005207200.1 | protein InvA | VFG0198 | Protein | 8e-92 | 43 |
| invA | YP_005207200.1 | protein InvA | VFG0384 | Protein | 2e-101 | 42 |
