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Name : wbpM (PSF113_1659) Accession : YP_005207078.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein WbpM Function : - COG functional category : - COG ID : - EC number : 5.1.3.- Position : 1930619 - 1932628 bp Length : 2010 bp Strand : + Note : nucleotide sugar epimerase/dehydratase WbpM DNA sequence : GTGCATGAAGGTGTTATGAGCAAATTTAGAACAGCTTTGCTGGGGTTGCCGAGACGACACAAGCGCGCAATCCAGCTGGC GGCAGACGTTGTGCTCGTCTGGGTCGCCCTATGGCTGGCATTTGTCGTTCGCTTGGGCATCGAGGCTTTGGCCAGCCCAA TTGAAACGCACCTTTGGCTTTTCGCATCGGCTCCATTGATCGCTATTCCGATCTTCATCCGCTTTGGCATGTATCGCGCA GTCATGCGTTATTTCGGTAATGACGCGCTGATCACGATTTGCAAGGCGGTCAGCCTTTCGGCCTTGTTGCTGGCCCTGGT GGTGTATTGGTACAGCAACCATAAAACCGTGGTGCCACGCTCCATCATTTTCAACTACTGGTGGCTAAGTCTGATCATGA TTGGCGGCTTGCGCCTGATGATGCGGCAATATTTCCTGGGGGACTGGTTTACCGCAGCCCAGCATGTGCCCTTCACCAAC CGTGACGACGGTTTGCCCAAGGTTGCTATTTATGGTGCCGGGGCCGCAGGTAACCAGCTCGTGGCCGCGCTGCGCATGGG GCGGGTGATGCGACCGGTCGCATTCATCGATGATGACAACAGCATCGCTGACCGCGTTATCGCTGGGCTACAGGTCTACG CACCCAAGCATATCCAAAAAATGATCGACACAACCGGTGCACAGGAGATTCTGCTGGCGGTGCCTTCTTCGTCACGCGGT CGGCGTCGGGAGATCTTGACGTTGCTTGAAGGCTTCCCCCTGCATGTCCGTAGCGTCCCCGGGTTCATGGACCTGGCCAG CGGCCGGGTCAAGGTCGATGATATCCAGGAGGTGGACATTGCGGACCTTCTAGGACGCGATCCGGTCCCTGCACAACCTG ACCTGCTGGAACATTGCATCACTGGCCAGTCGGTCCTGGTCACTGGGGCCGGTGGTTCGATTGGCTCCGAGCTTTGTCGA CAAATCCTGGCACTGAAGCCGACTACGCTGTTGCTGTACGAGCATAGCGAATTCAATCTCTATAGCATTCTGTCTGAACT AGAACCTCGAGTTATTCGGGAATCGTTGTCCGTTCGTCTGCTGCCTATCCTCGGATCAGTACGAGACCAGGACAAACTGC TGGACGTGATGAAGACCTGGAATGTCGATACGGTCTATCATGCCGCCGCTTATAAACATGTCCCGATGGTCGAGCACAAC ATAGCCGAAGGTGTCCTGAACAATGTGATCGGCACGTTGAATACGGCACAGGCTGCGCTGCAGGCAGGTGTATCGAACTT CGTGCTGATCTCCACGGATAAAGCGGTGCGCCCGACCAATGTCATGGGCAGCACCAAGCGGCTTGCGGAGCTGACCTTGC AAGCCCTCAGCCGTGAGCTGGCCCCTGTGTTGTTCGGTGACAAGGGCAACGTTTCGCGGGTGAACAAGACGCGTTTTACC ATGGTCCGGTTCGGCAACGTACTGGGTTCGTCCGGTTCGGTCATCCCCCTGTTCCATAAACAGATCAAGTCCGGCGGGCC GTTGACCGTTACCCACCCCAAGATCACTCGCTATTTCATGACCATTCCCGAGGCCGCGCAGTTGGTGATCCAGGCGGGCT CCATGGGGTTGGGCGGCGATGTGTTTGTGCTGGATATGGGCGAACCGGTAAAGATTATCGAGCTGGCGGAAAAGATGATT CACCTGTCTGGCTTGAGCGTCCGTTCGGAAAAGAACCCCCACGGCGACATTTCAATCGAGTTCACAGGCCTGCGCCCAGG CGAGAAACTTTACGAGGAGTTGCTGATTGGCGACAACGTCGTCGCCACCCAGCACCCGATGATCATGAGTGCCAACGAGG ACCATCTGTCTTGGGACGCGCTCAAGAACAAGCTGACCGAATTGTTGGCCGCCATTGAGCATGATGACTACACCAGGGTC CGCCAACTGCTTCGGGACACGGTCAGTGGTTACGCCCCGGACGGCGAGATTGTCGACTGGATCTACCAGCAACGCCGCCT CGAACCCTGA Protein sequence : MHEGVMSKFRTALLGLPRRHKRAIQLAADVVLVWVALWLAFVVRLGIEALASPIETHLWLFASAPLIAIPIFIRFGMYRA VMRYFGNDALITICKAVSLSALLLALVVYWYSNHKTVVPRSIIFNYWWLSLIMIGGLRLMMRQYFLGDWFTAAQHVPFTN RDDGLPKVAIYGAGAAGNQLVAALRMGRVMRPVAFIDDDNSIADRVIAGLQVYAPKHIQKMIDTTGAQEILLAVPSSSRG RRREILTLLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDPVPAQPDLLEHCITGQSVLVTGAGGSIGSELCR QILALKPTTLLLYEHSEFNLYSILSELEPRVIRESLSVRLLPILGSVRDQDKLLDVMKTWNVDTVYHAAAYKHVPMVEHN IAEGVLNNVIGTLNTAQAALQAGVSNFVLISTDKAVRPTNVMGSTKRLAELTLQALSRELAPVLFGDKGNVSRVNKTRFT MVRFGNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGLGGDVFVLDMGEPVKIIELAEKMI HLSGLSVRSEKNPHGDISIEFTGLRPGEKLYEELLIGDNVVATQHPMIMSANEDHLSWDALKNKLTELLAAIEHDDYTRV RQLLRDTVSGYAPDGEIVDWIYQQRRLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-78 | 43 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_005207078.1 | protein WbpM | VFG0029 | Protein | 6e-118 | 48 |
| wbpM | YP_005207078.1 | protein WbpM | VFG1300 | Protein | 4e-77 | 41 |
