|
Name : lysS (PSF113_1092) Accession : YP_005206516.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : LysS protein Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1302373 - 1303875 bp Length : 1503 bp Strand : + Note : Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGACCTAGAACTCGACCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGCCAGGCCTTCCCCAACGACTTCCGCCGCGACGCCTACTGCGACGTCTTGCAGAAGCTGTATG CGGACAAGACCAAGGAAGAGCTGGCCGAGGCGGCGATTCCAGTCAAGGTGGCCGGTCGTATCGTGCTCGATCGTGGTTCG TTCATGGTGATCCAGGACATGACCGGGCGCCTCCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGC CGTCAAGACCTGGGACCTGGGCGACATCATTGCCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AGATGACCAGCGTGCGCCTGCTGACCAAGTCCCTGCGCCCGCTGCCGGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTATCGCCAGCGCTACGTCGACCTGATCGTCAACGAAGACGTGCGCCAGACGTTCCGCGTGCGCTCGCAAGTCATCGC CCACATCCGCAGCTTCCTGATGAAGCGTGACTTCCTGGAAGTCGAGACGCCGATGCTGCAGACCATCCCCGGCGGTGCGG CGGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGAAATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGTCTGGTTGTGGGTGGCTTCGAAAAAGTCTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACCCGGCACAA CCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTATGAAGACAACATGGACCTGACTGAGGAGCTGTTCC GCGAGCTGGCCCAGCTTGTTCTCGGGACGACCGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGTGAGCCGTTCGTG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCTGAACTGACTGCCGATGACCTGAACGACATCGAAAAGGCCCG CGCCATCGCCAAGAAGGCCGGTGCCAAGGTGCTCGGCTTCGAAGGCCTGGGCAAGCTGCAAGTGATGATTTTCGAAGAGT TGGTCGAGCACAAGCTGGAACAGCCGCACTTCATCACCCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GAGAACCCAAGCGTGACCGACCGTTTCGAGCTGTTCATCGGTGGCCGTGAAATCGCCAACGCCTATTCCGAGCTCAACGA TGCAGAAGACCAGGCCGAGCGTTTCATGGCCCAGGTGGCTGACAAGGACGCCGGCGACGACGAAGCCATGCACTACGATG CCGACTTCGTGCGTGCTCTGGAATACGGCATGCCGCCGACCGCTGGCGAAGGTATCGGCATCGATCGCCTGGTGATGTTG TTGACCAACTCTCCGTCGATCCGGGACGTGATTCTCTTCCCGCACATGCGGCCTCAAGCGTAA Protein sequence : MSDLELDPQALQQEENSLIALRKEKLAAERAKGQAFPNDFRRDAYCDVLQKLYADKTKEELAEAAIPVKVAGRIVLDRGS FMVIQDMTGRLQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTADDLNDIEKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND ENPSVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-132 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 7e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005206516.1 | LysS protein | VFG1668 | Protein | 2e-132 | 60 |
