Gene Information

Name : hom (PSF113_1064)
Accession : YP_005206488.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1269356 - 1270660 bp
Length : 1305 bp
Strand : +
Note : Homoserine dehydrogenase

DNA sequence :
GTGAATCCGGTCAAAGTAGGCATCTGTGGGTTAGGTACCGTCGGTGGCGGCACCTTCAACGTACTTCAGCGCAACGCCGA
GGAAATTGCTCGTCGTGCCGGGCGTGGGATCGAAGTGGCACAAATTGCCATGCGCACGCCAAAGCCTCAGTTCCAGACGA
CCGGTATTGCGATTACCAACGATGTCTTCGAAGTGGCCACGAACCCTGAGATCGACATCGTCATAGAGCTGGTCGGCGGC
TACACCGTTGCCCGCGAGCTGGTACTCAAGGCCATCGAGAATGGCAAGCATGTGGTCACCGCGAACAAGGCGCTTATCGC
TGTTCACGGTAATGAGATTTTCGCCAAGGCCCGCGAGAAGGGCGTGATCGTGGCTTTCGAAGCCGCCGTGGCCGGTGGTA
TCCCGGTGATCAAGGCGATCCGCGAAGGCCTGTCGGCCAACCGCATCAACTGGGTCGCGGGGATCATCAACGGCACCGGC
AACTTCATCCTCACCGAGATGCGCGAGAAGGGTCGCACCTTCGAAGACGTGCTCGCCGAAGCCCAGGCCCTGGGCTACGC
AGAGGCTGATCCGACGTTCGACGTGGAAGGCATCGACGCAGCGCACAAGCTGACGATCCTGGCCTCCATTGCGTTCGGCA
TTCCGTTGCAGTTCGACAAGGCCTACACCGAAGGCATCACCAAGCTGACCACCGCTGACGTGAACTACGCCGAAGCCTTG
GGCTATCGTATCAAGCACCTGGGCGTGGCGCGCAGCACCGCAAACGGCATCGAGCTGCGCGTGCACCCGACCTTGATCCC
GGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTGATGGTCAACGGCGACGCCTCCGGCTCGACGCTGT
TCTACGGCGCCGGTGCGGGCATGGAGCCGACGGCCTCTTCGGTGATCGCCGACCTGGTGGACGTGGTTCGCGCCATGACC
TCGGACCCGGAAAACCGTGTGCCACACCTGGCCTTCCAGCCAGACTCGCTGTCGGCTCATCCGATTCTTCCGATCGAGGC
ATGCGAAAGCTCCTACTACCTGCGCATCCAGGCCAAGGACCATCCGGGTGTGCTGGCGCAAGTGGCGAGCATTCTCTCGG
AGCGCGGGATCAACATCGAGTCGATCATGCAGAAGGAAGTCGAGGAACACGACGGCCTGGTGCCGATGATCCTGCTGACC
CACCGTGTGGTCGAGCAGCGCATCAACGACGCGATTGCGGCGCTCGAAGCGCTCCAGGGTGTCGTTGGCCCGGTGGTCCG
TATCCGTGTCGAACATTTGAATTAA

Protein sequence :
MNPVKVGICGLGTVGGGTFNVLQRNAEEIARRAGRGIEVAQIAMRTPKPQFQTTGIAITNDVFEVATNPEIDIVIELVGG
YTVARELVLKAIENGKHVVTANKALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLSANRINWVAGIINGTG
NFILTEMREKGRTFEDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITKLTTADVNYAEAL
GYRIKHLGVARSTANGIELRVHPTLIPADRLIANVNGVMNAVMVNGDASGSTLFYGAGAGMEPTASSVIADLVDVVRAMT
SDPENRVPHLAFQPDSLSAHPILPIEACESSYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLT
HRVVEQRINDAIAALEALQGVVGPVVRIRVEHLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 2e-115 59
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 2e-115 59