Gene Information

Name : xerD (PSF113_1062)
Accession : YP_005206486.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : XerD protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.41
Position : 1267385 - 1268281 bp
Length : 897 bp
Strand : +
Note : Tyrosine recombinase XerD

DNA sequence :
ATGCCAGCCATCGATCATCCGTTGATAGACCAGTTTCTCGACGCCCTGTGGCTGGAGAAGGGCCTGTCCGATAACACCCG
CGATGCCTATCGCAGCGACCTGGCGCTGTTCAACGGTTGGTTGCAGGAAAATCACCTGGAACTGATCAATGCTGGCCGGG
AATTGATCCTCGATCACTTGGCGTGGCGCCTGGAGCAGAACTACAAGCCGCGCTCGACCGCGCGTTTTCTCTCCGGCCTG
CGTGGGTTCTATCGCTATTTGCTGCGGGAAAAGCTGATTGCGGTGGACCCGACCTTGCGCGTGGAAATGCCGCAACTGGG
GCGCCCATTGCCCAAGTCCCTGTCGGAAGCCGATGTGGAGGCGCTGCTGGCGGCACCCGACCTTAGCGAAGCCATCGGTC
AGCGCGACCGGGCCATGCTGGAAGTCTTGTACGCCTGCGGCCTGCGGGTCACCGAGTTGATCAGCTTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGCTGCGGGTGATGGGTAAAGGCAGCAAGGAGCGCCTGGTGCCGATGGGGGAGGAAGCGAT
CGTCTGGGTCGAGCGCTACATGCGCGATGCCCGCCACGAACTGTTGGGGGGGCGCCCCAGCGATGTGCTGTTCCCCAGCC
TGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCACCGGATCAAGCACCAGGCCAAGGTGGCCGGGATCAACAAATCC
CTCTCGCCCCACACCTTGCGCCATGCCTTTGCCACGCACCTGCTCAACCACGGCGCCGACCTGCGGGTGGTGCAGATGCT
GCTCGGCCACAGCGACCTGTCCACCACCCAGATCTACACCCACGTCGCCCGGGCGCGGCTGCAGGACTTGCATGCCAAAC
ACCATCCGCGCGGCTGA

Protein sequence :
MPAIDHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFNGWLQENHLELINAGRELILDHLAWRLEQNYKPRSTARFLSGL
RGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQ
VNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARHELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGINKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-67 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-67 55