|
Name : smpB (MYM_0329) Accession : YP_005205072.1 Strain : Mycoplasma hyorhinis GDL-1 Genome accession: NC_016829 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 416065 - 416502 bp Length : 438 bp Strand : + Note : Identified by match to HMM PF01668.12; identified by match to HMM TIGR00086 DNA sequence : ATGAAAATAATAGCAAAAAATAAAGTTGCATACTATGATTATGAAATTTTAGAGACTTTTGAAGCAGGTATTAGTTTAAT GGGTTGAGAAGTAAAATCCATTAGAGCAAATAAAGTGAATTTAAAAAATTCTTTTGCTTATTTTAAAGATTTAGAACTTT ATTGATCAAATGCACATATTTCTTTATACATGGCAGTTAAAGGTGATGAACAAAGAACAAGAAAACTCCTTATGCACAAA AGTGAATTGAAAAAAATTCATTTTAAAAAAACTACAAATAGACTTACTTTAATCCCTTTATCCTTGTACTGAAAGCAAGG AAAAATTAAACTAGAATTAGCACTTGCAAAAGGTAAAACTAAATACGACAAACGTCAAAGCGAAAAAGCTAAAGAAGAAA AAAGAAAAATTGAAAAGATGTTAAAAAATTATTCTTAA Protein sequence : MKIIAKNKVAYYDYEILETFEAGISLMGWEVKSIRANKVNLKNSFAYFKDLELYWSNAHISLYMAVKGDEQRTRKLLMHK SELKKIHFKKTTNRLTLIPLSLYWKQGKIKLELALAKGKTKYDKRQSEKAKEEKRKIEKMLKNYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-18 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-15 | 41 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-17 | 41 |
