Gene Information

Name : Sinf_1962 (Sinf_1962)
Accession : YP_005204720.1
Strain : Streptococcus infantarius CJ18
Genome accession: NC_016826
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1985627 - 1986106 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGTAAAAATTATTGCTGTTGGAAAATTAAAAGAAAAATACCTAAAAGATGGTATTGCAGAATACGGAAAACGCAT
GATTCGCTTTGCCAAATTTGAAATTGTTGAGTTGTCCGATGAAAAAACACCAGATAATGCGAGTGAGGCGCAAAATCATC
AAATCATGGAAAAAGAGGGTGACCGTATTTTAGCTAAAATCTCTGAGCGCGATTATGTCATTGTTTTGGCTATTGAAGGT
AAACAATTCCCATCAGAAGAATTTAGTAGGATTATCGCTGATGCAACTTTGAGAGGTTATTCGGACATTGTATTTGTCAT
TGGAGGTAGCCTAGGTTTAGCTGACAAGGTAAAAAAACGTGCAAATTTAAAAATGAGTTTTGGTTCACTAACTTTACCTC
ATCAGTTAATGCGCTTAGTTTTAGCTGAGCAAATTTATCGAGCTTTCATGATACAACAAGGAAGTCCTTATCATAAGTAA

Protein sequence :
MKVKIIAVGKLKEKYLKDGIAEYGKRMIRFAKFEIVELSDEKTPDNASEAQNHQIMEKEGDRILAKISERDYVIVLAIEG
KQFPSEEFSRIIADATLRGYSDIVFVIGGSLGLADKVKKRANLKMSFGSLTLPHQLMRLVLAEQIYRAFMIQQGSPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-38 53
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-38 53
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-38 53
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-38 53
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 5e-38 53
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 5e-38 53
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 5e-38 53
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 5e-38 53
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 5e-38 53
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 5e-38 53
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 5e-38 53
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 5e-38 53
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 6e-37 52
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-37 52
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-34 50
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 1e-36 50
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-36 50
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-37 50
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-22 47