Gene Information

Name : lysS (Sinf_1342)
Accession : YP_005204125.1
Strain : Streptococcus infantarius CJ18
Genome accession: NC_016826
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1376021 - 1377511 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAACGAACACATTGAAGAATTAAACGACCAACAAATCGTGCGTCGTGAAAAAATGGCAGCTTTGGCTGAACAAGG
CATCGATCCTTTCGGAACTCGATTTGAACGCACAGCTACTTCTGGTCAATTAAAAGAAAAATACGCTGACAAAACTAAAG
AAGAACTGCATGAAATTAACAAGACAGCTACTATCGCTGGTCGCTTGATGACTAAGCGTGGTAAAGGTAAAGTTGGTTTT
GCGCACATTCAAGACCGCGACGGTCAAATCCAAATCTATGTCCGCAAAGATGCTGTCGGTGATGAAAACTATCAAATTTT
CAAAAAAGCAGACCTCGGTGACTTCCTCGGTATCGAAGGTGAAATCATGCGTACAGACATGGGTGAATTGACAATCAAAG
CAACTCACATCACTCACTTGTCTAAAGCACTTCGTCCACTTCCAGAAAAATTCCACGGACTTACAGACGTTGAAACAATC
TACCGTAAACGTTACCTTGATTTGATTTCAAACCGTGAAAGCTTTGAACGCTTTGTCACACGTTCAAAAATCATCTCAGA
AATCCGTCGTTACCTTGATGGACTTGGCTTCCTAGAAGTTGAAACTCCAGTTCTTCACAACGAAGCTGGCGGTGCTGCTG
CTCGTCCATTCGTTACTCACCACAATGCGCAAGACATGGATATGGTTCTTCGTATCGCTTTGGAACTTCACTTGAAACGT
CTTATCGTTGGTGGTATGGAAAAAGTTTACGAAATCGGACGTGTCTTCCGTAACGAAGGTATGGATGCAACTCACAACCC
TGAGTTCACTATGATCGAACTTTACGAAGCATACGCTGACTTCAAAGATATCATGGACATCACAGAAGGTATCATCCAAA
ATGCTTCTGCTGCTGTTAACGGTAACGGACCTATCACTTACCAAGGTACTGAAATTGCTATCGACCAACCATTCAAACGT
ATCCACATGGTTGACGCTATCAAAGAAGTTACTGGTGTAGACTTCTGGAAAGAAATGACTCTTGAAGAAGCTCAAGAACT
TGCTAAAGAGAAAAACGTTCCAGTTGAAAAACACTTCACTTCAGTTGGTCACATCATCAACGCCTTCTTCGAAGAATTTG
TTGAAGAAACATTAATCCAACCAACATTCGTATACGGACACCCAGTTGAAGTATCTCCACTTGCTAAGAAAAATGCAGAA
GATACTCGCTTCACTGACCGTTTCGAACTCTTCATCATGACTAAAGAATACGGTAACGCTTATTCAGAGCTTAACGATCC
AATCGACCAATTGTCACGTTTCGAAGCTCAAGCTAAAGCTAAAGAACTTGGTGATGACGAAGCAACAGGTGTTGACTACG
ACTACGTCGAAGCTCTTGAATACGGTATGCCACCAACAGGTGGACTTGGTATCGGTATCGACCGTCTTGTCATGCTCCTT
ACAGATACAACAACAATCCGTGACGCTTTGTTGTTCCCAACAATGAAATAA

Protein sequence :
MSNEHIEELNDQQIVRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGF
AHIQDRDGQIQIYVRKDAVGDENYQIFKKADLGDFLGIEGEIMRTDMGELTIKATHITHLSKALRPLPEKFHGLTDVETI
YRKRYLDLISNRESFERFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFVTHHNAQDMDMVLRIALELHLKR
LIVGGMEKVYEIGRVFRNEGMDATHNPEFTMIELYEAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEIAIDQPFKR
IHMVDAIKEVTGVDFWKEMTLEEAQELAKEKNVPVEKHFTSVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAE
DTRFTDRFELFIMTKEYGNAYSELNDPIDQLSRFEAQAKAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLVMLL
TDTTTIRDALLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-110 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005204125.1 lysyl-tRNA synthetase VFG1668 Protein 5e-110 46