Gene Information

Name : Sinf_1081 (Sinf_1081)
Accession : YP_005203874.1
Strain : Streptococcus infantarius CJ18
Genome accession: NC_016826
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1102053 - 1104161 bp
Length : 2109 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAACAATCAATTTTACGGAAGAGATCCTTTTGGAAATATGGATGATATCTTCAACCAATTAATGGGAAACATGGG
AGGATACAATTCAGAAAATAGACGTTACCTAATCAATGGTCGCGAAGTAACTCCTGAAGAATTTGCTCAATACCGTCAAA
CTGGTAAATTCCCAGGAAATGCTGATTATCAAGAAGGTGCTCCTACTTCTGCACCTAAAGAAGATGGTATCTTGGCTAAA
CTTGGAACAAACTTAACTGAACGTGCTCGTAACAACGAACTCGATCCCGTTATCGGACGTAACAAGGAAATTCAAGAAAC
AGCTGAAATCTTGTCTCGTCGTACAAAGAACAACCCAGTTCTAGTCGGGGATGCTGGTGTTGGTAAAACAGCTGTCGTTG
AAGGATTAGCGCAAGCTATTGTTAACGGTGACGTGCCTGCTGCTATTAAGAACAAAGAAATCATCTCAATTGATATTTCA
GGCCTTGAAGCTGGTACACAATACCGTGGTAGCTTTGAAGAAAACATTCAAAACTTGGTAAATGAAGTCAAAGAAGCTGG
AAACATTATCCTCTTCTTCGATGAAATTCATCAAATTCTTGGTGCCGGAAGCACTGGCGATGGTCAAGGTTCTAAAGGTC
TGGCTGATATCTTGAAACCTGCTCTTTCACGTGGTGAAATAACAGTGATTGGTGCAACAACTCAAGATGAATACCGTAAC
ACTATCTTGAAGAATGCTGCCCTTGCTCGTCGTTTCAACGAAGTTAAGGTCAATGCTCCTTCTCCTGAAGATACCTTCAA
GATTCTTCAAGGTATTCGTGATCTTTATGAAAAACACCACAATGTTATCTTGCCAGATGAAGTCTTGAAAGCAGCGGTTG
ATTTTTCAGTACAATACATTCCACAACGTAGCTTGCCAGATAAGGCTATTGACCTTTTGGACGTGACAGCAGCTCACTTG
GCAGCACAACATCCAGTAACTGATGTTAAATCACTTGAAAAAGAAATTGCAGAACAAAAAGAAAAACAAGAAGCTGCTGC
CGCTAAAGAAGACTACGAAGCAGCCCTTAATGCTAAAGTGCGTATCGAAGAATTGCAAAAACAAATCGACAATCACACAG
AAGATAAAAAAGTCACTGCAACTGTTAACGACGTGGCTGAATCCGTAGAACGTATGACTGGTATTCCAGTATCTCAAATG
GGTGCAACGGATATCGAACGTTTGAAAGATATGGGTAACCGTTTGCAAGCTAAGGTTATCGGTCAAGATAAGGCCGTTGA
AGCAGTGGCACGTTCCATCCGTCGTAATCGTGCAGGATTTGACGATGGTAACCGTCCAATCGGTAGCTTCCTCTTTGTAG
GACCTACTGGTGTTGGTAAAACTGAGTTGGCTAAACAATTGGCCCTTGATTTGTTCGGTACCAAAGATGCTATCATCCGT
TTGGACATGTCAGAATACAGCGACCGCACAGCCGTTTCTAAATTGATCGGTACAACAGCTGGTTATGTTGGTTACGATGA
CAACAATAACACACTTACTGAACGTGTTCGTCGTAACCCTTATTCAATCATCCTTCTTGATGAAATTGAAAAGGCAGACC
CTCAAGTTATCACCCTTCTCCTCCAAGTTTTGGATGATGGCCGTTTGACTGATGGTCAAGGTAATACTGTAAACTTCAAG
AACACAGTCATTATCGCAACTTCAAACGCTGGCTTTGGTTACGAATCTAACTGGACAGAAGATGATGATAAACCAGAACT
CATGGATCGTTTGAAACCTTACTTCCGTCCTGAATTCCTTAATCGTTTCGACGCAGTTATTGAGTTCTCACACTTAGATA
AGGAGGACCTTTCTAAGATTGTCGATCTTATGTTGAATGAAGTTAACAAGACTCTTTCTAAGAAAGGCATTGAGTTGTCA
GTTAGCGAAGCTGCTAAAGCCTATATGACAGAAGAAGGCTATGATGAAGTTATGGGTGCTCGTCCACTCCGTCGTGTGGT
TGAACAACAAATCCGTGACAAAGTCACAGACTTCCACTTGGATAACCTTGATGCTAAACACCTTAAAGCTGATATGGTTG
ACGGAGAACTTGTTATCAGCGAAAAATAA

Protein sequence :
MANNQFYGRDPFGNMDDIFNQLMGNMGGYNSENRRYLINGREVTPEEFAQYRQTGKFPGNADYQEGAPTSAPKEDGILAK
LGTNLTERARNNELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDIS
GLEAGTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGEITVIGATTQDEYRN
TILKNAALARRFNEVKVNAPSPEDTFKILQGIRDLYEKHHNVILPDEVLKAAVDFSVQYIPQRSLPDKAIDLLDVTAAHL
AAQHPVTDVKSLEKEIAEQKEKQEAAAAKEDYEAALNAKVRIEELQKQIDNHTEDKKVTATVNDVAESVERMTGIPVSQM
GATDIERLKDMGNRLQAKVIGQDKAVEAVARSIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGTKDAIIR
LDMSEYSDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFK
NTVIIATSNAGFGYESNWTEDDDKPELMDRLKPYFRPEFLNRFDAVIEFSHLDKEDLSKIVDLMLNEVNKTLSKKGIELS
VSEAAKAYMTEEGYDEVMGARPLRRVVEQQIRDKVTDFHLDNLDAKHLKADMVDGELVISEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-126 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinf_1081 YP_005203874.1 ATP-dependent Clp protease, ATP-binding subunit VFG0080 Protein 3e-144 49
Sinf_1081 YP_005203874.1 ATP-dependent Clp protease, ATP-binding subunit VFG0079 Protein 2e-133 45