Gene Information

Name : STBHUCCB_p1910 (STBHUCCB_p1910)
Accession : YP_005202804.1
Strain :
Genome accession: NC_016825
Putative virulence/resistance : Resistance
Product : transposon Tn10 tetC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 142483 - 143076 bp
Length : 594 bp
Strand : +
Note : similar to tetracycline repressor protein TetR PRK13756; similar to Transposon Tn10 tetC protein of root UniRef RepID=TETC_ECOLX

DNA sequence : 
ATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAACTCAGCACGAATATTGTTTGT
TGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCGGGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACT
TTAAAAATAAAAAACAATTACTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACT
GATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATTATTGATAATAATAAAAACCT
TATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAATGAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGG
TAAACGCCATTGTCAGCAAATTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAAT
GGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAAGGCCAATTTATTGCTATTTA
CCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA

Protein sequence : 
MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKT
DLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetC AAL08446.1 putative transcriptional regulator TetC Not tested SRL Protein 3e-87 100
tetC AEA34666.1 tetracycline resistance protein C Not tested Not named Protein 3e-87 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_p1910 YP_005202804.1 transposon Tn10 tetC protein NC_010558.1.6275977. Protein 1e-87 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_p1910 YP_005202804.1 transposon Tn10 tetC protein VFG1037 Protein 1e-87 100