Gene Information

Name : STBHUCCB_p1350 (STBHUCCB_p1350)
Accession : YP_005202750.1
Strain :
Genome accession: NC_016825
Putative virulence/resistance : Unknown
Product : insertion element IS1 protein insB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 102888 - 103391 bp
Length : 504 bp
Strand : -
Note : similar to Insertion element IS1 protein insB of root UniRef RepID=INSB_ECOLX

DNA sequence :
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGTTACGTCGGTGCTAAAT
CACGCCAGCGCTGGTTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGATGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGACTGGCCGCTTTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGGCATAACCTGAATCTGAGAC
AGCATCTGGCAAGGCTGGGCAGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence :
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
AMLGRLMSLLSPFDVVIWMTDDWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 8e-77 99
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 8e-77 99
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 8e-77 99
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 2e-74 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 2e-75 96
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-55 91
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 3e-70 89
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 3e-70 89
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-69 88
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-69 88
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-68 87
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 7e-55 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_p1350 YP_005202750.1 insertion element IS1 protein insB VFG0612 Protein 3e-68 87