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Name : SSON53_03450 (SSON53_03450) Accession : YP_005455267.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional activator KdpE Function : - COG functional category : - COG ID : - EC number : - Position : 689941 - 690618 bp Length : 678 bp Strand : - Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCG CGTCTTTGAGGCCGAAACTCTGCAACGCGGCTTGCTGGAAGCGGCAACCCGTAAGCCAGATTTGATTATTCTCGATCTCG GCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCCCGGTGCCGGTGATTGTGCTTTCCGCA CGCAGCGAAGAGAGCGACAAGATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTGAGTAAGCCGTTTGGCATTGGCGA ATTGCAGGCCCGTCTGCGCGTCGCTTTACGCCGCCACTCCGCCACCGCCGCGCCCGATCCGCTGGTGAAATTTTCCGATG TTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACACCAATTGAGTTCCGCCTGCTG GCGGTGCTGCTCAACAATGCCGGAAAAGTACTCACCCAGCGCCAGCTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGA ACACAGTCACTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCGGCCCGGCCTCGCCACTTCA TTACTGAAACCGGTATTGGATATCGGTTTATGCTTTGA Protein sequence : MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSPVPVIVLSA RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-25 | 43 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 5e-25 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 7e-25 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 7e-25 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-25 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 7e-25 | 42 |
