Gene Information

Name : SSON53_02985 (SSON53_02985)
Accession : YP_005455174.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : phosphoadenosine phosphosulfate reductase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 600410 - 601630 bp
Length : 1221 bp
Strand : -
Note : COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase

DNA sequence :
ATGTCTATTTATAAAATTCCTCTTCCGCTCAATATTCTGGAAGCTGCACGAGAGCGTATTACCTGGACACTCAACACCCT
ACCCCGCGTTTGTGTCTCATTTTCTGGCGGCAAAAACTCTGGTTTAATGCTGCATCTGACAGCCGAACTTGCCCGACAAA
TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAGGCGCAATTCTCTTGCACCATTAACTATGTTCAGTCCCTGCGC
GAGTTGTACACCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCACAATACCA
ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTGCGTCAGCCCCCGCAAGATGCGATAACCGATCCTGACTTTT
TCTGCTTTTACCAGCCAGGCATGACCTTCGAACAATTTGTACGTGAGTTTGCCGAATGGTTTTCACAAAAACGTCCGGTG
GCGATGATGATCGGCATCCGTGCGGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC
CGACGATAAACCATGGACTACGGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATTTACGACTGGAAAGTGGCTG
ATATCTGGACCTGGTATGCAAATCATCAAAATCTCTGCAACCCACTGTATAACCTAATGTATCAGGCAGGCGTTCCTCTG
CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGACAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG
CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGATAATCATTTCTATGGGC
ATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACA
GCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAGGTTCCACAAACCCAGCA
AGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGGATATGCAAAGTTTTACTCAATAACGATTACTGGTGTCGGG
CATTATCATTTAGTCCTACGAAAGCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGG
ATACTATGCAACAACGATTAA

Protein sequence :
MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKNSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLR
ELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPV
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQNLCNPLYNLMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT
AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWG
ILCNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 3e-125 59
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 6e-124 59
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-125 59
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 6e-124 59
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-125 59
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-125 59
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 7e-124 59
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 2e-124 59
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 7e-125 58
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 4e-125 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_02985 YP_005455174.1 phosphoadenosine phosphosulfate reductase family protein VFG1504 Protein 2e-125 59